ProFi Achievements

Publications

559 Entrées « 1 de 6 »

2020

Pirro, M; Rombouts, Y; Stella, A; Neyrolles, O; Burlet-Schiltz, O; van Vliet, S J; de Ru, A H; Mohammed, Y; Wuhrer, M; van Veelen, P A; Hensbergen, P J

Characterization of Macrophage Galactose-type Lectin (MGL) ligands in colorectal cancer cell lines Article de journal

Biochim Biophys Acta Gen Subj, 1864 (4), p. 129513, 2020.

Liens

Ibrahim, M; Ayoub, D; Wasselin, T; Dorsselaer, Van A; Maho, Le Y; Raclot, T; Bertile, F

Alterations in rat adipose tissue transcriptome and proteome in response to prolonged fasting Article de journal

Biological Chemistry, 401 (3), p. 389-405, 2020.

Liens

Bouyssié, D; Hesse, A M; Mouton-Barbosa, E; Rompais, M; Macron, C; Carapito, C; de Peredo, A G; Couté, Y; Dupierris, V; Burel, A; Menetrey, J P; Kalaitzakis, A; Poisat, J; Romdhani, A; Burlet-Schiltz, O; Cianférani, S; Garin, J; Bruley, C

Proline: an efficient and user-friendly software suite for large-scale proteomics Article de journal

Bioinformatics, 2020.

Liens

Bonnet, M; Soulat, J; Bons, J; Leger, S; Koning, De L; Carapito, C; Picard, B

Quantification of biomarkers for beef meat qualities using a combination of Parallel Reaction Monitoring- and antibody-based proteomics Article de journal

Food Chem, 317 , p. 126376., 2020.

Liens

Locard-Paulet, M; Bouyssié, D; Froment, C; Burlet-Schiltz, O; Jensen, L J

Comparing 22 Popular Phosphoproteomics Pipelines for Peptide Identification and Site Localization Article de journal

J. Proteome Res., 19 (3), p. 1338–1345, 2020.

Liens

Imbert, C; Montfort, A; Fraisse, M; Marcheteau, E; Gilhodes, J; Martin, E; Bertrand, F; Marcellin, M; Burlet-Schiltz, O; Peredo, A G; Garcia, V; Carpentier, S; Tartare-Deckert, S; Brousset, P; Rochaix, P; Puisset, F; Filleron, T; Meyer, N; Lamant, L; Levade, T; Ségui, B; Andrieu-Abadie, N; Colacios, C

Resistance of melanoma to immune checkpoint inhibitors is overcome by targeting the sphingosine kinase-1 Article de journal

Nat Commun, 11 (1), p. 437, 2020.

Liens

Froment, C; Hourset, M; S?enz-Oyh?r?guy, N; Mouton-Barbosa, E; Willmann, C; Zanolli, C; Esclassan, R; Donat, R; Th?ves, C; Burlet-Schiltz, O; Mollereau, C

Analysis of 5000 year-old human teeth using optimized large-scale and targeted proteomics approaches for detection of sex-specific peptides Article de journal

J Proteomics, 211 , p. 103548, 2020.

Liens

Clement, E; Lazar, I; Attané, C; Carrié, L; Dauvillier, S; Ducoux-Petit, M; Estève, D; Menneteau, T; Moutahir, M; Gonidec, Le S; Dalle, S; Valet, P; Burlet-Schiltz, O; Muller, C; Nieto, L

Adipocyte extracellular vesicles carry enzymes and fatty acids that stimulate mitochondrial metabolism and remodeling in tumor cells Article de journal

EMBO J., 39 (3), p. e102525, 2020.

Liens

Allison, T M; Barran, P E; Benesch, J L P; Cianferani, S; Degiacomi, M T; Gabelica, V; Grandori, R; Marklund, E G; Menneteau, T; Migas, L G; Politis, A; Sharon, M; Sobott, F; Thalassinos, K

Software requirements for the analysis and interpretation of native ion mobility mass spectrometry data Article de journal

Anal Chem, 2020, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking), (review, pas de projet LSMBO).

Liens

Allison, T M; Barran, P E; Cianferani, S; Degiacomi, M T; Gabelica, V; Grandori, R; Marklund, E G; Menneteau, T; Migas, L G; Politis, A; Sharon, M; Sobott, F; Thalassinos, K; Benesch, J L P

Computational strategies and challenges for using native ion mobility mass spectrometry in biophysics and structural biology Article de journal

Anal Chem, 2020, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking), (review pas de projet LSMBO).

Liens

Botzanowski, T; Hernandez-Alba, O; Malissard, M; Wagner-Rousset, E; Desligniere, E; Colas, O; Haeuw, J F; Beck, A; Cianferani, S

Middle Level IM-MS and CIU Experiments for Improved Therapeutic Immunoglobulin Subclass Fingerprinting Article de journal

Anal Chem, 92 (13), p. 8827-8835, 2020, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking).

Liens

Castro, C N; Rosenzwajg, M; Carapito, R; Shahrooei, M; Konantz, M; Khan, A; Miao, Z; Gross, M; Tranchant, T; Radosavljevic, M; Paul, N; Stemmelen, T; Pitoiset, F; Hirschler, A; Nespola, B; Molitor, A; Rolli, V; Pichot, A; Faletti, L E; Rinaldi, B; Friant, S; Mednikov, M; Karauzum, H; Aman, M J; Carapito, C; Lengerke, C; Ziaee, V; Eyaid, W; Ehl, S; Alroqi, F; Parvaneh, N; Bahram, S

NCKAP1L defects lead to a novel syndrome combining immunodeficiency, lymphoproliferation, and hyperinflammation Article de journal

J Exp Med, 217 (12), 2020, ISSN: 1540-9538 (Electronic) 0022-1007 (Linking), (????).

Liens

Chabrol, E; Stojko, J; Nicolas, A; Botzanowski, T; Fould, B; Antoine, M; Cianferani, S; Ferry, G; Boutin, J A

VHH characterization.Recombinant VHHs: Production, characterization and affinity Article de journal

Anal Biochem, 589 , p. 113491, 2020, ISSN: 1096-0309 (Electronic) 0003-2697 (Linking).

Liens

Charles, L; Mondal, T; Greff, V; Razzini, M; Monnier, V; Burel, A; Carapito, C; Lutz, J F

Optimal conditions for tandem mass spectrometric sequencing of information-containing nitrogen-substituted polyurethanes Article de journal

Rapid Commun Mass Spectrom, 34 (14), p. e8815, 2020, ISSN: 1097-0231 (Electronic) 0951-4198 (Linking), (????).

Liens

Ciudad, S; Puig, E; Botzanowski, T; Meigooni, M; Arango, A S; Do, J; Mayzel, M; Bayoumi, M; Chaignepain, S; Maglia, G; Cianferani, S; Orekhov, V; Tajkhorshid, E; Bardiaux, B; Carulla, N

Abeta(1-42) tetramer and octamer structures reveal edge conductivity pores as a mechanism for membrane damage Article de journal

Nat Commun, 11 (1), p. 3014, 2020, ISSN: 2041-1723 (Electronic) 2041-1723 (Linking), (2018/12).

Liens

Dovgan, I; Ehkirch, A; Lehot, V; Kuhn, I; Koniev, O; Kolodych, S; Hentz, A; Ripoll, M; Ursuegui, S; Nothisen, M; Cianferani, S; Wagner, A

On the use of DNA as a linker in antibody-drug conjugates: synthesis, stability and in vitro potency Article de journal

Sci Rep, 10 (1), p. 7691, 2020, ISSN: 2045-2322 (Electronic) 2045-2322 (Linking), (2019-05).

Liens

Duivelshof, B L; Desligniere, E; Hernandez-Alba, O; Ehkirch, A; Toftevall, H; Sjogren, J; Cianferani, S; Beck, A; Guillarme, D; D'Atri, V

Glycan-Mediated Technology for Obtaining Homogeneous Site-Specific Conjugated Antibody-Drug Conjugates: Synthesis and Analytical Characterization by Using Complementary Middle-up LC/HRMS Analysis Article de journal

Anal Chem, 92 (12), p. 8170-8177, 2020, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking), (pas de manips au LSMBO).

Liens

Farras, M; Miret, J; Camps, M; Roman, R; Martinez, O; Pujol, X; Erb, S; Ehkirch, A; Cianferani, S; Casablancas, A; Cairo, J J

Homogeneous antibody-drug conjugates: DAR 2 anti-HER2 obtained by conjugation on isolated light chain followed by mAb assembly Article de journal

MAbs, 12 (1), p. 1702262, 2020, ISSN: 1942-0870 (Electronic) 1942-0862 (Linking), (2018/06).

Liens

Hernandez-Alba, O; Ehkirch, A; Beck, A; Cianferani, S

Analysis of ADCs by Native Mass Spectrometry Article de journal

Methods Mol Biol, 2078 , p. 197-211, 2020, ISSN: 1940-6029 (Electronic) 1064-3745 (Linking), (review).

Liens

Humbert, N; Kovalenko, L; Saladini, F; Giannini, A; Pires, M; Botzanowski, T; Cherenok, S; Boudier, C; Sharma, K K; Real, E; Zaporozhets, O A; Cianferani, S; Seguin-Devaux, C; Poggialini, F; Botta, M; Zazzi, M; Kalchenko, V I; Mori, M; Mely, Y

(Thia)calixarenephosphonic Acids as Potent Inhibitors of the Nucleic Acid Chaperone Activity of the HIV-1 Nucleocapsid Protein with a New Binding Mode and Multitarget Antiviral Activity Article de journal

ACS Infect Dis, 6 (4), p. 687-702, 2020, ISSN: 2373-8227 (Electronic) 2373-8227 (Linking).

Résumé | Liens

Kenny, H C; Tascher, G; Ziemianin, A; Rudwill, F; Zahariev, A; Chery, I; Gauquelin-Koch, G; Barielle, M P; Heer, M; Blanc, S; O'Gorman, D J; Bertile, F

Effectiveness of Resistive Vibration Exercise and Whey Protein Supplementation Plus Alkaline Salt on the Skeletal Muscle Proteome Following 21 Days of Bed Rest in Healthy Males Article de journal

J Proteome Res, 19 (8), p. 3438-3451, 2020, ISSN: 1535-3907 (Electronic) 1535-3893 (Linking), (2011/34).

Liens

Laurens, C; Parmar, A; Murphy, E; Carper, D; Lair, B; Maes, P; Vion, J; Boulet, N; Fontaine, C; Marquès, M; Larrouy, D; Harant, I; Thalamas, C; Montastier, E; Caspar-Baugil, S; Bourlier, V; Tavernier, G; Grolleau, J L; Bouloumié, A; Langin, D; Viguerie, N; Bertile, F; Blanc, S; Glisezinski, De I; O’Gorman, D; Moro, C

Growth and differentiation factor 15 is secreted by skeletal muscle during exercise and promotes lipolysis in humans Article de journal

JCI Insight, 5 (6), p. E131870, 2020, (2016/26).

Lefeuvre, B; Cantero, P; Ehret-Sabatier, L; Lenormand, C; Barthel, C; Po, C; Parveen, N; Grillon, A; Jaulhac, B; Boulanger, N

Effects of topical corticosteroids and lidocaine on Borrelia burgdorferi sensu lato in mouse skin: potential impact to human clinical trials Article de journal

Sci Rep, 10 (1), p. 10552, 2020, ISSN: 2045-2322 (Electronic) 2045-2322 (Linking), (2012/30).

Liens

Luu, B E; Lefai, E; Giroud, S; Swenson, J E; Chazarin, B; Gauquelin-Koch, G; Arnemo, J M; Evans, A L; Bertile, F; Storey, K B

MicroRNAs facilitate skeletal muscle maintenance and metabolic suppression in hibernating brown bears Article de journal

J Cell Physiol, 235 (4), p. 3984-3993, 2020, ISSN: 1097-4652 (Electronic) 0021-9541 (Linking), (2011/34).

Liens

Perraud, Q; Cantero, P; Roche, B; Gasser, V; Normant, V P; Kuhn, L; Hammann, P; Mislin, G L A; Ehret-Sabatier, L; Schalk, I J

Phenotypic Adaption of Pseudomonas aeruginosa by Hacking Siderophores Produced by Other Microorganisms Article de journal

Mol Cell Proteomics, 19 (4), p. 589-607, 2020, ISSN: 1535-9484 (Electronic) 1535-9476 (Linking), (2015/28).

Liens

Postic, G; Marcoux, J; Reys, V; Andreani, J; Vandenbrouck, Y; Bousquet, M P; Mouton-Barbosa, E; Cianferani, S; Burlet-Schiltz, O; Guerois, R; Labesse, G; Tuffery, P

Probing Protein Interaction Networks by Combining MS-Based Proteomics and Structural Data Integration Article de journal

J Proteome Res, 19 (7), p. 2807-2820, 2020, ISSN: 1535-3907 (Electronic) 1535-3893 (Linking), (pas de projet, pas de manips au labo).

Liens

Sabou, M; Doderer-Lang, C; Leyer, C; Konjic, A; Kubina, S; Lennon, S; Rohr, O; Viville, S; Cianferani, S; Candolfi, E; Pfaff, A W; Brunet, J

Toxoplasma gondii ROP16 kinase silences the cyclin B1 gene promoter by hijacking host cell UHRF1-dependent epigenetic pathways Article de journal

Cell Mol Life Sci, 77 (11), p. 2141-2156, 2020, ISSN: 1420-9071 (Electronic) 1420-682X (Linking).

Liens

Sabou, M; Doderer-Lang, C; Leyer, C; Konjic, A; Kubina, S; Lennon, S; Rohr, O; Viville, S; Cianferani, S; Candolfi, E; Pfaff, A W; Brunet, J

Toxoplasma gondii ROP16 kinase silences the cyclin B1 gene promoter by hijacking host cell UHRF1-dependent epigenetic pathways Article de journal

Cell Mol Life Sci, 77 (11), p. 2141-2156, 2020, ISSN: 1420-9071 (Electronic) 1420-682X (Linking), (2011/26).

Liens

Sornay, C; Hessmann, S; Erb, S; Dovgan, I; Ehkirch, A; Botzanowski, T; Cianferani, S; Wagner, A; Chaubet, G

Investigating Ugi / Passerini multicomponent reactions for the Site-Selective Conjugation of Native Trastuzumab Article de journal

Chemistry, 2020, ISSN: 1521-3765 (Electronic) 0947-6539 (Linking), (2018/30).

Liens

Spenle, C; Loustau, T; Murdamoothoo, D; Erne, W; la Divonne, Beghelli-de Forest S; Veber, R; Petti, L; Bourdely, P; Morgelin, M; Brauchle, E M; Cremel, G; Randrianarisoa, V; Camara, A; Rekima, S; Schaub, S; Nouhen, K; Imhof, T; Hansen, U; Paul, N; Carapito, R; Pythoud, N; Hirschler, A; Carapito, C; Dumortier, H; Mueller, C G; Koch, M; Schenke-Layland, K; Kon, S; Sudaka, A; Anjuere, F; Obberghen-Schilling, Van E; Orend, G

Tenascin-C Orchestrates an Immune-Suppressive Tumor Microenvironment in Oral Squamous Cell Carcinoma Article de journal

Cancer Immunol Res, 2020, ISSN: 2326-6074 (Electronic) 2326-6066 (Linking), (????).

Liens

Tessier, R; Nandi, R K; Dwyer, B G; Abegg, D; Sornay, C; Ceballos, J; Erb, S; Cianferani, S; Wagner, A; Chaubet, G; Adibekian, A; Waser, J

Ethynylation of Cysteine Residues: From Peptides to Proteins in Vitro and in Living Cells Article de journal

Angew Chem Int Ed Engl, 59 (27), p. 10961-10970, 2020, ISSN: 1521-3773 (Electronic) 1433-7851 (Linking).

Liens

Thompson, D; Cognat, V; Goodfellow, M; Koechler, S; Heintz, D; Carapito, C; Dorsselaer, Van A; Mahmoud, H; Sangal, V; Ismail, W

Phylogenomic Classification and Biosynthetic Potential of the Fossil Fuel-Biodesulfurizing Rhodococcus Strain IGTS8 Article de journal

Front Microbiol, 11 , p. 1417, 2020, ISSN: 1664-302X (Print) 1664-302X (Linking), (???).

Liens

Wagner, E; Colas, O; Chenu, S; Goyon, A; Murisier, A; Cianferani, S; Francois, Y; Fekete, S; Guillarme, D; D'Atri, V; Beck, A

Determination of size variants by CE-SDS for approved therapeutic antibodies: Key implications of subclasses and light chain specificities Article de journal

J Pharm Biomed Anal, 184 , p. 113166, 2020, ISSN: 1873-264X (Electronic) 0731-7085 (Linking), (pas de manip MS).

Liens

Wagner-Rousset, E; Colas, O; Francois, Y N; Heinisch, S; Guillarme, D; Cianferani, S; Beck, A

Drug Loading and Distribution of ADCs After Reduction or IdeS Digestion and Reduction Article de journal

Methods Mol Biol, 2078 , p. 187-195, 2020, ISSN: 1940-6029 (Electronic) 1064-3745 (Linking), (pas de manip MS LSMBO).

Liens

2019

Bouyssié, D; Lesne, J; Locard-Paulet, M; Albigot, R; Burlet-Schiltz, O; Marcoux, J

HDX-Viewer: interactive 3D visualization of hydrogen-deuterium exchange data Article de journal

Bioinformatics, 35 (24), p. 5331–5333, 2019.

Liens

Santin, Y; Fazal, L; Sainte-Marie, Y; Sicard, P; Maggiorani, D; Tortosa, F; Y?cel, Y Y; Teyssedre, L; Rouquette, J; Marcellin, M; Vindis, C; Shih, J C; Lairez, O; Burlet-Schiltz, O; Parini, A; Lezoualc'h, F; Mialet-Perez, J

Mitochondrial 4-ĦNE derived from MAO-A promotes mitoCa2+ overload in chronic postischemic cardiac remodeling Article de journal

Cell Death Differ., 2019.

Liens

Baxter, P N W; Ouahabi, Al A; Karmazin, L; Varnek, A; Strub, J M; Cianferani, S

An Investigation into the Stephens-Castro Synthesis of Dehydrotriaryl[12]annulenes: Factors Influencing the Cyclotrimerization Article de journal

European Journal of Organic Chemistry, 40 , p. 6783-6795, 2019, (2019-02).

Liens

Barre, A; Pichereaux, C; Velazquez, E; Maudouit, A; Simplicien, M; Garnier, L; Bienvenu, F; Bienvenu, J; Burlet-Schiltz, O; Auriol, C; Benoist, H; Rougé, P

Insights into the Allergenic Potential of the Edible Yellow Mealworm (Ŧenebrio molitor) Article de journal

Foods, 8 (10), 2019.

Liens

Voisinne, G; Kersse, K; Chaoui, K; Lu, L; Chaix, J; Zhang, L; Menoita, Goncalves M; Girard, L; Ounoughene, Y; Wang, H; Burlet-Schiltz, O; Luche, H; Fiore, F; Malissen, M; de Peredo, Gonzalez A; Liang, Y; Roncagalli, R; Malissen, B

Quantitative interactomics in primary T cells unveils TCR signal diversification extent and dynamics Article de journal

Nat. Immunol., 20 (11), p. 1530–1541, 2019.

Liens

Ayala-Nunez, NV.; Follain, G; Delalande, F; Hirschler, A; Partiot, E; Hale, GL.; Bollweg, BC.; Roels, J; Chazal, M; Bakoa, F; Carocci, M; Bourdoulous, S; Faklaris, O; Zaki, SR.; Eckly, A; Uring-Lambert, B; Doussau, F; Cianferani, S; Carapito, C; Jacobs, FMJ.; Jouvenet, N; Goetz, JG.; Gaudin, R

Zika virus enhances monocyte adhesion and transmigration favoring viral dissemination to neural cells Article de journal

Nat Commun. 2019 Sep 27;10(1):4430., 2019.

Liens

S, Hessmann Erb Rabuka Huguet Josephs Beck Drake PM Cianférani Hernandez-Alba Houel S S D R J A S O

A Case Study to Identify the Drug Conjugation Site of a Site-Specific Antibody-Drug-Conjugate Using Middle-Down Mass Spectrometry Article de journal

J Am Soc Mass Spectrom., 30 (11), p. 2419-2429., 2019.

Liens

Schneider, F; Dureau, A -F; Hellé, S; Betscha, C; Senger, B; Cremel, G; Boulmedais, F; Strub, J M; Corti, A; Meyer, N; Guillot, M; Schaaf, P; Metz-Boutigue, M H

A Pilot Study on Continuous Infusion of 4% Albumin in Critically Ill Patients: Impact on Nosocomial Infection via a Reduction Mechanism for Oxidized Substrates Article de journal

Critical Care Explorations, 1 (9), 2019, (non).

Liens

Sabou, M; Doderer-Lang, C; Leyer, C; Konjic, A; Kubina, S; Lennon, S; Rohr, O; Viville, S; Cianférani, S; Candolfi, E; Pfaff, AW.; Brunet, J

Toxoplasma gondii ROP16 kinase silences the cyclin B1 gene promoter by hijacking host cell UHRF1-dependent epigenetic pathways Article de journal

Cell Mol Life Sci. 2019 Sep 6., 2019.

Liens

Hartmann, L; Botzanowski, T; Galibert, M; Jullian, M; l Chabrol, E; Zeder-Lutz, G; Kugler, V; Stojko, J; Strub, JM.; Ferry, G; Frankiewicz, L; Puget, K; Wagner, R; Cianférani, S; Boutin, JA.

VHH characterization. Comparison of recombinant with chemically synthesized anti-HER2 VHH Article de journal

Protein Sci., 28 (10), p. 1865-1879, 2019.

Liens

Chazarin, B; Ziemianin, A; Evans, A L; Meugnier, E; Loizon, E; Chery, I; Arnemo, J M; Swenson, J E; Gauquelin-Koch, G; Simon, C; Blanc, S; Lefai, E; Bertile, F

Limited oxidative stress favors resistance to skeletal muscle atrophy in hibernating brown bears (Ursus arctos) Article de journal

Antioxidants, 8 (9), p. 334, 2019, (2011/34).

Liens

Gervason, S; Larkem, D; Mansour, AB.; Botzanowski, T; Müller, CS.; Pecqueur, L; Pavec, Le G; Delaunay-Moisan, A; Brun, O; Agramunt, J; Grandas, A; Fontecave, M; Schünemann, V; Cianférani, S; Sizun, C; Tolédano, MB.; D'Autréaux, B

Physiologically relevant reconstitution of iron-sulfur cluster biosynthesis uncovers persulfide-processing functions of ferredoxin-2 and frataxin Article de journal

Nat Commun., 10 (1), p. 3566, 2019.

Liens

Sanchez, CP.; Cubel, Moliner S; Nyboer, B; Jankowska-Döllken, M; Schaeffer-Reiss, C; Ayoub, D; Planelles, G; Lanzer, M

Phosphomimetic substitution at Ser-33 of the chloroquine resistance transporter PfCRT reconstitutes drug responses in Plasmodium falciparum Article de journal

J Biol Chem., p. pii: jbc.RA119.009464., 2019.

Liens

Quque, M; Benhaim-Delarbre, M; Deneubourg, JL.; Sueur, C; Criscuolo, F; Bertile, F

Division of labour in the black garden ant (Lasius niger) leads to three distinct proteomes Article de journal

J Insect Physiol., 117 , p. 103907, 2019, (2015/29).

Liens

Dalzon, B; Bons, J; Diemer, H; Collin-Faure, V; Marie-Desvergne, C; Dubosson, M; Cianferani, S; Carapito, C; Rabilloud, T

A Proteomic View of Cellular Responses to Anticancer Quinoline-Copper Complexes Article de journal

Proteomes, 7 (2), p. pii: E26, 2019.

Liens

Chazarin, B; Storey, KB.; Ziemianin, A; Chanon, S; Plumel, M; Chery, I; Durand, C; Evans, AL.; Arnemo, JM.; Zedrosser, A; Swenson, JE.; Gauquelin-Koch, G; Simon, C; Blanc, S; Lefai, E; Bertile, F

Metabolic reprogramming involving glycolysis in the hibernating brown bear skeletal muscle Article de journal

Front Zool., 16 , p. 12, 2019.

Liens

Plumel, M; Dumont, S; Maes, P; Sandu, C; Felder-Scmittbuhl, M P; Challet, E; Bertile, F

Circadian Analysis of the Mouse Cerebellum Proteome Article de journal

International Journal of Molecular Sciences, 20 (8), p. 1852, 2019, (2012/26).

Liens

Giroud, S; Chery, I; F., Bertile;; Bertrand-Michel, J; Tascher, G; Gauquelin-Koch, G; Arnemo, J M; Swenson, J E; Singh, N V; Lefai, E; Evans, A L; Simon, C; Blanc, S

Lipidomics Reveals Seasonal Shifts in a Large-Bodied Hibernator, the Brown Bear Article de journal

Front Physiol., 10 , p. 389, 2019, (2011/30).

Liens

Camus, M; Hirschi, S; Prevot, G; Chenard, M P; Mal, H; Stern, M; Reynaud-Gaubert, M; Gilhodes, J; Burlet-Schiltz, O; Brousset, P; Colombat, M

Proteomic evidence of specific IGKV1-8 association with cystic lung light chain deposition disease Article de journal

Blood, 133 (26), p. 2741–2744, 2019.

Liens

Chabert, M; Rousset, X; Colombat, M; Lacasa, M; Kakanakou, H; Bourderioux, M; Brousset, P; Burlet-Schiltz, O; Liepnieks, J J; Kluve-Beckerman, B; Lambert, G; Châtelet, F P; Benson, M D; Kalopissis, A D

A transgenic mouse model reproduces human hereditary systemic amyloidosis Article de journal

Kidney Int., 96 (3), p. 628–641, 2019.

Liens

Bons, J; Macron, C; Aude-Garcia, C; Vaca-Jacome, SA.; Rompais, M; Cianférani, S; Carapito, C; Rabilloud, T

A Combined N-terminomics and Shotgun Proteomics Approach to Investigate the Responses of Human Cells to Rapamycin and Zinc at the Mitochondrial Level Article de journal

Mol Cell Proteomics, 18 (6), p. 1085-1095, 2019.

Liens

Muller, L; Fornecker, L; Cianferani, S; Carapito, C

Tube-Gel: A Fast and Effective Sample Preparation Method for High-Throughput Quantitative Proteomics Article de journal

Methods Mol Biol., 1959 , p. 123-127, 2019.

Liens

Pichereaux, C; Laurent, E A; Gargaros, A; Viudes, S; Durieu, C; Lamaze, T; Grieu, P; Burlet-Schiltz, O

Analysis of durum wheat proteome changes under marine and fungal biostimulant treatments using large-scale quantitative proteomics: A useful dataset of durum wheat proteins Article de journal

J Proteomics, 200 , p. 28–39, 2019.

Liens

Tascher, G; Burban, A; Camus, S; Plumel, M; Chanon, S; Guevel, Le R; Shevchenko, V; Dorsselaer, Van A; Lefai, E; Guguen-Guillouzo, C; Bertile, F

In-Depth Proteome Analysis Highlights HepaRG Cells as a Versatile Cell System Surrogate for Primary Human Hepatocytes Article de journal

Cells, 8 (2), p. 192, 2019, (2012/20).

Liens

Beck, A; D'Atri, V; Ehkirch, A; Fekete, S; Hernandez-Alba, O; Gahoual, R; Leize-Wagner, E; François, Y; Guillarme, D; Cianférani, S

Cutting-edge multi-level analytical and structural characterization of antibody-drug conjugates: present and future Article de journal

Expert Rev Proteomics., 16 (4), p. 337-362., 2019, (review).

Liens

Locard-Paulet, M; Parra, J; Albigot, R; Mouton-Barbosa, E; Bardi, L; Burlet-Schiltz, O; Marcoux, J

VisioProt-MS: interactive 2D maps from intact protein mass spectrometry Article de journal

Bioinformatics, 35 (4), p. 679–681, 2019.

Liens

Strassel, C; Magiera, MM.; Dupuis, A; Batzenschlager, M; Hovasse, A; Pleines, I; Guéguen, P; Eckly, A; Moog, S; Mallo, L; Kimmerlin, Q; Chappaz, S; Strub, JM.; Kathiresan, N; de la Salle, H; Dorsselaer, Van A; Ferec, C; Py, JY.; Gachet, C; Schaeffer-Reiss, C; Kile, BT.; Janke, C; Lanza, F

An essential role for α4A-tubulin in platelet biogenesis Article de journal

Life Sci Alliance, 2 (1), p. pii: e201900309., 2019.

Liens

Hyenne, V; Ghoroghi, S; Collot, M; Bons, J; Follain, G; Harlepp, S; Mary, B; Bauer, J; Mercier, L; Busnelli, I; Lefebvre, O; Fekonja, N; Garcia-Leon, MJ.; Machado, P; Delalande, F; López, AA.; Silva, SG.; Verweij, FJ.; van Niel, G; Djouad, F; Peinado, H; Carapito, C; Klymchenko, AS.; Goetz, JG.

Studying the Fate of Tumor Extracellular Vesicles at High Spatiotemporal Resolution Using the Zebrafish Embryo Article de journal

Dev Cell., 48 (4), p. 554-572.e7, 2019.

Liens

Menneteau, T; Fabre, B; Garrigues, L; Stella, A; Zivkovic, D; Roux-Dalvai, F; Mouton-Barbosa, E; Beau, M; Renoud, M L; Amalric, F; Sensébé, L; Gonzalez-de-Peredo, A; Ader, I; Burlet-Schiltz, O; Bousquet, M P

Mass Spectrometry-based Absolute Quantification of 20S Proteasome Status for Controlled Ex-vivo Expansion of Ħuman Adipose-derived Mesenchymal Stromal/Stem Cells Article de journal

Mol. Cell Proteomics, 18 (4), p. 744–759, 2019.

Liens

Fornecker, LM.; Muller, L; Bertrand, F; Paul, N; Pichot, A; Herbrecht, R; Chenard, MP.; Mauvieux, L; Vallat, L; Bahram, S; Cianférani, S; Carapito, R; Carapito, C

Multi-omics dataset to decipher the complexity of drug resistance in diffuse large B-cell lymphoma Article de journal

Sci Rep., 9 (1), p. 895, 2019.

Liens

Aniort, J; Stella, A; Philipponnet, C; Poyet, A; Polge, C; Claustre, A; Combaret, L; B?chet, D; Attaix, D; Boisgard, S; Filaire, M; Rosset, E; Burlet-Schiltz, O; Heng, A E; Taillandier, D

Muscle wasting in patients with end-stage renal disease or early-stage lung cancer: common mechanisms at work Article de journal

J Cachexia Sarcopenia Muscle, 10 (2), p. 323–337, 2019.

Liens

Groysbeck, N; Stoessel, A; Donzeau, M; da Silva, EC.; Lehmann, M; Strub, JM.; Cianferani, S; Dembélé, K; Zuber, G

Synthesis and biological evaluation of 2.4 nm thiolate-protected gold nanoparticles conjugated to Cetuximab for targeting glioblastoma cancer cells via the EGFR Article de journal

Nanotechnology, 30 (18), p. 184005., 2019.

Liens

Rochel, N; Krucker, C; Coutos-Thévenot, L; Osz, J; Zhang, R; Guyon, E; Zita, W; Vanthong, S; Hernandez-Alba, O; Bourguet, M; Badawy, Al K; Dufour, F; Peluso-Iltis, C; Heckler-Beji, S; Dejaegere, A; Kamoun, A; de Reyniès, A; Neuzillet, Y; Rebouissou, S; Béraud, C; Lang, H; Massfelder, T; Allory, Y; Cianférani, S; Stote, R H; Radvanyi, F; Bernard-Pierrot, I

Recurrent activating mutations of PPARγ associated with luminal bladder tumors Article de journal

Nature Communications, 10 (1), p. 253, 2019.

Liens

Niazi, AK.; Bariat, L; Riondet, C; Carapito, C; Mhamdi, A; Noctor, G; Reichheld, JP.

Cytosolic Isocitrate Dehydrogenase from Arabidopsis thaliana Is Regulated by Glutathionylation Article de journal

Antioxidants (Basel), 8 (1), p. pii: E16., 2019.

Liens

è, Agn; Tillet, Emmanuelle; Ricard, Nicolas; Ouarné, Marie; Mallet, Christine; Belmudes, Lucid; Couté, Yohann; Boillot, Olivier; Scoazec, Jean-Yves; Bailly, Sabine; Feige, Jean-Jacques

Bone Morphogenetic Protein 9 Is a Paracrine Factor Controlling Liver Sinusoidal Endothelial Cell Fenestration and Protecting Against Hepatic Fibrosis Article de journal

Hepatology (Baltimore, Md.), 70 (4), p. 1392–1408, 2019, ISSN: 1527-3350.

Résumé | Liens

Azevedo, Jacinthe; Picart, Claire; Dureau, Laurent; Pontier, Dominique; Jaquinod-Kieffer, Sylvie; Hakimi, Mohamed-Ali; Lagrange, Thierry

UAP56 associates with DRM2 and is localized to chromatin in Arabidopsis Article de journal

FEBS open bio, 9 (5), p. 973–985, 2019, ISSN: 2211-5463.

Résumé | Liens

Vandenbrouck, Yves; Christiany, David; Combes, Florence; Loux, Valentin; Brun, Virginie

Bioinformatics Tools and Workflow to Select Blood Biomarkers for Early Cancer Diagnosis: An Application to Pancreatic Cancer Article de journal

Proteomics, 19 (21-22), p. e1800489, 2019, ISSN: 1615-9861.

Résumé | Liens

Guillot, Laetitia; Delage, Ludovic; Viari, Alain; Vandenbrouck, Yves; Com, Emmanuelle; Ritter, Andrés; Lavigne, Régis; Marie, Dominique; Peterlongo, Pierre; Potin, Philippe; Pineau, Charles

Peptimapper: proteogenomics workflow for the expert annotation of eukaryotic genomes Article de journal

BMC genomics, 20 (1), p. 56, 2019, ISSN: 1471-2164.

Résumé | Liens

Legendre, Matthieu; Alempic, Jean-Marie; è, Nad; Lartigue, Audrey; Jeudy, Sandra; Poirot, Olivier; Ta, Ngan Thi; Nin, Sébastien; Couté, Yohann; Abergel, Chantal; Claverie, Jean-Michel

Pandoravirus Celtis Illustrates the Microevolution Processes at Work in the Giant Pandoraviridae Genomes Article de journal

Frontiers in Microbiology, 10 , p. 430, 2019, ISSN: 1664-302X.

Résumé | Liens

Do, Le Duy; Gupton, Stephanie L; Tanji, Kunikazu; Bastien, Joubert; è, Sabine Brugi; Couté, Yohann; Quadrio, Isabelle; Rogemond, Veronique; Fabien, Nicole; Desestret, Virginie; Honnorat, Jerome

TRIM9 and TRIM67 Are New Targets in Paraneoplastic Cerebellar Degeneration Article de journal

Cerebellum (London, England), 18 (2), p. 245–254, 2019, ISSN: 1473-4230.

Résumé | Liens

Wieczorek, Samuel; Giai Gianetto, Quentin ; Burger, Thomas

Five simple yet essential steps to correctly estimate the rate of false differentially abundant proteins in mass spectrometry analyses Article de journal

Journal of Proteomics, 207 , p. 103441, 2019, ISSN: 18743919.

Résumé | Liens

Wei, Jiajie; Kishton, Rigel J; Angel, Matthew; Conn, Crystal S; Dalla-Venezia, Nicole; Marcel, Virginie; Vincent, Anne; Catez, Frédéric; Ferré, Sabrina; Ayadi, Lilia; Marchand, Virginie; Dersh, Devin; Gibbs, James S; Ivanov, Ivaylo P; Fridlyand, Nathan; Couté, Yohann; Diaz, Jean-Jacques; Qian, Shu-Bing; Staudt, Louis M; Restifo, Nicholas P; Yewdell, Jonathan W

Ribosomal Proteins Regulate MHC Class I Peptide Generation for Immunosurveillance Article de journal

Molecular Cell, 2019, ISSN: 1097-4164.

Résumé | Liens

Kraut, Alexandra; Louwagie, Mathilde; Bruley, Christophe; Masselon, Christophe; Couté, Yohann; Brun, Virginie; Hesse, Anne-Marie

Protein Biomarker Discovery in Non-depleted Serum by Spectral Library-Based Data-Independent Acquisition Mass Spectrometry Article de journal

Methods in Molecular Biology (Clifton, N.J.), 1959 , p. 129–150, 2019, ISSN: 1940-6029.

Résumé | Liens

Steingruber, Mirjam; Keller, Lena; Socher, Eileen; Ferre, Sabrina; Hesse, Anne-Marie; Couté, Yohann; Hahn, Friedrich; Büscher, Nicole; Plachter, Bodo; Sticht, Heinrich; Marschall, Manfred

Cyclins B1, T1, and H differ in their molecular mode of interaction with cytomegalovirus protein kinase pUL97 Article de journal

The Journal of Biological Chemistry, 294 (15), p. 6188–6203, 2019, ISSN: 1083-351X.

Résumé | Liens

Siebert, Claire; Lindgren, Helena; Ferré, Sabrina; Villers, Corinne; Boisset, Sandrine; Perard, Julien; Sjöstedt, Anders; Maurin, Max; Brochier-Armanet, Céline; Couté, Yohann; Renesto, Patricia

Francisella tularensis: FupA mutation contributes to fluoroquinolone resistance by increasing vesicle secretion and biofilm formation Article de journal

Emerging Microbes & Infections, 8 (1), p. 808–822, 2019, ISSN: 2222-1751.

Résumé | Liens

Lupette, Josselin; Jaussaud, Antoine; Seddiki, Khawla; Morabito, Christian; è, Sabine Brugi; Schaller, Hubert; Kuntz, Marcel; Putaux, Jean-Luc; Jouneau, Pierre-Henri; Rébeillé, Fabrice; Falconet, Denis; Couté, Yohann; Jouhet, Juliette; Tardif, Marianne; Salvaing, Juliette; Maréchal, Eric

The architecture of lipid droplets in the diatom Phaeodactylum tricornutum Article de journal

Algal Research, 38 , p. 101415, 2019, ISSN: 2211-9264.

Résumé | Liens

Bouchnak, Imen; è, Sabine Brugi; Moyet, Lucas; Le Gall, Sophie ; Salvi, Daniel; Kuntz, Marcel; Tardif, Marianne; Rolland, Norbert

Unraveling Hidden Components of the Chloroplast Envelope Proteome: Opportunities and Limits of Better MS Sensitivity Article de journal

Molecular & cellular proteomics: MCP, 18 (7), p. 1285–1306, 2019, ISSN: 1535-9484.

Résumé | Liens

Moulin, M; Mossou, E; Signor, L; Kieffer-Jaquinod, S; Kwaambwa, H M; Nermark, F; Gutfreund, P; Mitchell, E P; Haertlein, M; Forsyth, V T; Rennie, A R

Towards a molecular understanding of the water purification properties of Moringa seed proteins Article de journal

Journal of Colloid and Interface Science, 554 , p. 296–304, 2019, ISSN: 1095-7103.

Résumé | Liens

Hajj Chehade, Mahmoud ; Pelosi, Ludovic; Fyfe, Cameron David; Loiseau, Laurent; è, Béreng; è, Sabine Brugi; Kazemzadeh, Katayoun; Vo, Chau-Duy-Tam; Ciccone, Lidia; Aussel, Laurent; Couté, Yohann; Fontecave, Marc; Barras, Frédéric; Lombard, Murielle; Pierrel, Fabien

A Soluble Metabolon Synthesizes the Isoprenoid Lipid Ubiquinone Article de journal

Cell Chemical Biology, 26 (4), p. 482––492.e7, 2019, ISSN: 2451-9448.

Résumé | Liens

Sentausa, Erwin; Basso, Pauline; Berry, Alice; Adrait, Annie; Bellement, Gwendoline; Couté, Yohann; Lory, Stephen; Elsen, Sylvie; Attrée, Ina

Insertion sequences drive the emergence of a highly adapted human pathogen Article de journal

Microbial Genomics, 2019, ISSN: 2057-5858.

Résumé | Liens

Braun, Laurence; Brenier-Pinchart, Marie-Pierre; Hammoudi, Pierre-Mehdi; Cannella, Dominique; Kieffer-Jaquinod, Sylvie; Vollaire, Julien; Josserand, Véronique; Touquet, Bastien; Couté, Yohann; Tardieux, Isabelle; Bougdour, Alexandre; Hakimi, Mohamed-Ali

The Toxoplasma effector TEEGR promotes parasite persistence by modulating NF-$kappa$B signalling via EZH2 Article de journal

Nature Microbiology, 4 (7), p. 1208–1220, 2019, ISSN: 2058-5276.

Résumé | Liens

Darrieutort-Laffite, Christelle; Arnolfo, Paul; Garraud, Thomas; Adrait, Annie; Couté, Yohann; Louarn, Guy; Trichet, Valérie; Layrolle, Pierre; Le Goff, Benoit ; Blanchard, Frédéric

Rotator Cuff Tenocytes Differentiate into Hypertrophic Chondrocyte-Like Cells to Produce Calcium Deposits in an Alkaline Phosphatase-Dependent Manner Article de journal

Journal of Clinical Medicine, 8 (10), 2019, ISSN: 2077-0383.

Résumé | Liens

Bhalla, Pratibha; Vernekar, Dipti Vinayak; Gilquin, Benoit; Couté, Yohann; Bhargava, Purnima

Interactome of the yeast RNA polymerase III transcription machinery constitutes several chromatin modifiers and regulators of the genes transcribed by RNA polymerase II Article de journal

Gene, 702 , p. 205–214, 2019, ISSN: 1879-0038.

Résumé | Liens

Jeudy, Sandra; Bertaux, Lionel; Alempic, Jean-Marie; Lartigue, Audrey; Legendre, Matthieu; Belmudes, Lucid; Santini, Sébastien; è, Nad; Beucher, Laure; Biondi, Emanuele G; Juul, Sissel; Turner, Daniel J; Couté, Yohann; Claverie, Jean-Michel; Abergel, Chantal

Exploration of the propagation of transpovirons within Mimiviridae reveals a unique example of commensalism in the viral world Article de journal

The ISME journal, 2019, ISSN: 1751-7370.

Résumé | Liens

Dell'Aglio, Elisa; Giustini, Cecile; Kraut, Alexandra; Couté, Yohann; Costa, Alex; Decros, Guillaume; Gibon, Yves; Mazars, Christian; Matringe, Michel; Finazzi, Giovanni; Curien, Gilles

Identification of the Arabidopsis calmodulin-dependent NAD+ kinase that sustains the elicitor-induced oxidative burst Article de journal

Plant Physiology, 2019, ISSN: 1532-2548.

Résumé | Liens

Chapelle, Jennifer; Sorokina, Oksana; McLean, Colin; Salemme, Vincenzo; Alfieri, Annalisa; Angelini, Costanza; Morellato, Alessandro; Adrait, Annie; Menna, Elisabetta; Matteoli, Michela; Couté, Yohann; Ala, Ugo; Turco, Emilia; Defilippi, Paola; Armstrong, Douglas J

Dissecting the Shared and Context-Dependent Pathways Mediated by the p140Cap Adaptor Protein in Cancer and in Neurons Article de journal

Frontiers in Cell and Developmental Biology, 7 , p. 222, 2019, ISSN: 2296-634X.

Liens

Sonego, Maura; Pellarin, Ilenia; Costa, Alice; Vinciguerra, Gian Luca Rampioni; Coan, Michela; Kraut, Alexandra; D'Andrea, Sara; Dall'Acqua, Alessandra; Castillo-Tong, Dan Cacsire; Califano, Daniela; Losito, Simona; Spizzo, Riccardo; Couté, Yohann; Vecchione, Andrea; Belletti, Barbara; Schiappacassi, Monica; Baldassarre, Gustavo

USP1 links platinum resistance to cancer cell dissemination by regulating Snail stability Article de journal

Science Advances, 5 (5), p. eaav3235, 2019, ISSN: 2375-2548.

Résumé | Liens

Louwagie, Mathilde; Kieffer-Jaquinod, Sylvie; Brun, Virginie

Ultrasensitive Quantification of Recombinant Proteins Using AAA-MS Article de journal

Methods in Molecular Biology (Clifton, N.J.), 2030 , p. 1–10, 2019, ISSN: 1940-6029.

Résumé | Liens

Chiumento, Steve; Roblin, Clarisse; Kieffer-Jaquinod, Sylvie; Tachon, Sybille; è, Chloé Lepr; Basset, Christian; Aditiyarini, Dwi; Olleik, Hamza; Nicoletti, Cendrine; Bornet, Olivier; Iranzo, Olga; Maresca, Marc; Hardré, Renaud; Fons, Michel; Giardina, Thierry; Devillard, Estelle; ç, Fran; Couté, Yohann; Atta, Mohamed; Perrier, Josette; Lafond, Mickael; Duarte, Victor

Ruminococcin C, a promising antibiotic produced by a human gut symbiont Article de journal

Science Advances, 5 (9), p. eaaw9969, 2019, ISSN: 2375-2548.

Résumé | Liens

Nguyen, Lien; Brun, Virginie; Combes, Florence; Loux, Valentin; Vandenbrouck, Yves

Designing an In Silico Strategy to Select Tissue-Leakage Biomarkers Using the Galaxy Framework Article de journal

Methods in Molecular Biology (Clifton, N.J.), 1959 , p. 275–289, 2019, ISSN: 1940-6029.

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Beurton, Flore; Stempor, Przemyslaw; Caron, Matthieu; Appert, Alex; Dong, Yan; Chen, Ron A -J; Cluet, David; Couté, Yohann; Herbette, Marion; Huang, Ni; è, Hél; Spichty, Martin; Bedet, Cécile; Ahringer, Julie; Palladino, Francesca

Physical and functional interaction between SET1/COMPASS complex component CFP-1 and a Sin3S HDAC complex in C. elegans Article de journal

Nucleic Acids Research, 2019, ISSN: 1362-4962.

Résumé | Liens

è, Hél; Guibert, Romain; Permiakova, Olga; Burger, Thomas

Distinguishing between Spectral Clustering and Cluster Analysis of Mass Spectra Article de journal

Journal of Proteome Research, 18 (1), p. 571–573, 2019, ISSN: 1535-3907.

Résumé | Liens

Wieczorek, Samuel; Combes, Florence; è, Hél; Burger, Thomas

Protein-Level Statistical Analysis of Quantitative Label-Free Proteomics Data with ProStaR Article de journal

Methods in Molecular Biology (Clifton, N.J.), 1959 , p. 225–246, 2019, ISSN: 1940-6029.

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Pinaud, Silvain; ï, Ana; ç, Jean-Fran; Belmudes, Lucid; Saint-Beat, Cécile; Arancibia, Nathalie; Galinier, Richard; Du Pasquier, Louis ; Duval, David; Gourbal, Benjamin

Molecular characterisation of immunological memory following homologous or heterologous challenges in the schistosomiasis vector snail, Biomphalaria glabrata Article de journal

Developmental and Comparative Immunology, 92 , p. 238–252, 2019, ISSN: 1879-0089.

Résumé | Liens

Deutsch, Eric W; Lane, Lydie; Overall, Christopher M; Bandeira, Nuno; Baker, Mark S; Pineau, Charles; Moritz, Robert L; Corrales, Fernando; Orchard, Sandra; Van Eyk, Jennifer E; Paik, Young-Ki; Weintraub, Susan T; Vandenbrouck, Yves; Omenn, Gilbert S

Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 3.0 Article de journal

Journal of Proteome Research, 2019, ISSN: 1535-3907.

Résumé | Liens

2018

Boeuf, A; Schnell, G; Bernard, Q; Kern, A; Westermann, B; Ehret-Sabatier, L; Grillon, A; Schramm, F; Jaulhac, B; Boulanger, N

Dissociating effect of salivary gland extract from Ixodes ricinus on human fibroblasts: Potential impact on Borrelia transmission Article de journal

Ticks Tick Borne Dis., 10 (2), p. 433–441, 2018, (2012/29).

Liens

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