ProFi Achievements

Publications

642 Entrées « 1 de 7 »

2021

Azevedo-Favory, J; Gaspin, C; Ayadi, L; Montacie, C; Marchand, V; Jobet, E; Rompais, M; Carapito, C; Motorin, Y; Saez-Vasquez, J

Mapping rRNA 2'-O-methylations and identification of C/D snoRNAs in Arabidopsis thaliana plants Article de journal

RNA Biol, p. 1-18, 2021, ISSN: 1555-8584 (Electronic) 1547-6286 (Linking), (Azevedo-Favory, J Gaspin, C Ayadi, L Montacie, C Marchand, V Jobet, E Rompais, M Carapito, C Motorin, Y Saez-Vasquez, J eng 2021/02/19 06:00 RNA Biol. 2021 Feb 17:1-18. doi: 10.1080/15476286.2020.1869892.).

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Beinsteiner, B; Markov, G V; Erb, S; Chebaro, Y; McEwen, A G; Cianferani, S; Laudet, V; Moras, D; Billas, I M L

A structural signature motif enlightens the origin and diversification of nuclear receptors Article de journal

PLoS Genet, 17 (4), p. e1009492, 2021, ISSN: 1553-7404 (Electronic) 1553-7390 (Linking), (Beinsteiner, Brice Markov, Gabriel V Erb, Stephane Chebaro, Yassmine McEwen, Alastair G Cianferani, Sarah Laudet, Vincent Moras, Dino Billas, Isabelle M L eng 2021/04/22 06:00 PLoS Genet. 2021 Apr 21;17(4):e1009492. doi: 10.1371/journal.pgen.1009492. eCollection 2021 Apr.).

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Bertile, F; Habold, C; Maho, Le Y; Giroud, S

Body Protein Sparing in Hibernators: A Source for Biomedical Innovation Article de journal

Front Physiol, 12 , p. 634953, 2021, ISSN: 1664-042X (Print) 1664-042X (Linking), (2011/34).

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Bertile, F; Plumel, M; Maes, P; Hirschler, A; Challet, E

Daytime Restricted Feeding Affects Day-Night Variations in Mouse Cerebellar Proteome Article de journal

Front Mol Neurosci, 14 , p. 613161, 2021, ISSN: 1662-5099 (Print) 1662-5099 (Linking), (2012/26).

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Bons, J; Husson, G; Chion, M; Bonnet, M; Maumy-Bertrand, M; Delalande, F; Cianferani, S; Bertrand, F; Picard, B; Carapito, C

Combining label-free and label-based accurate quantifications with SWATH-MS: Comparison with SRM and PRM for the evaluation of bovine muscle type effects Article de journal

Proteomics, 21 (10), p. e2000214, 2021, ISSN: 1615-9861 (Electronic) 1615-9853 (Linking), (Bons, Joanna Husson, Gauthier Chion, Marie Bonnet, Muriel Maumy-Bertrand, Myriam Delalande, Francois Cianferani, Sarah Bertrand, Frederic Picard, Brigitte Carapito, Christine eng Germany 2021/03/19 06:00 Proteomics. 2021 May;21(10):e2000214. doi: 10.1002/pmic.202000214. Epub 2021 Mar 30.).

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Bragantini, B; Charron, C; Bourguet, M; Paul, A; Tiotiu, D; Rothe, B; Marty, H; Terral, G; Hessmann, S; Decourty, L; Chagot, M E; Strub, J M; Massenet, S; Bertrand, E; Quinternet, M; Saveanu, C; Cianferani, S; Labialle, S; Manival, X; Charpentier, B

The box C/D snoRNP assembly factor Bcd1 interacts with the histone chaperone Rtt106 and controls its transcription dependent activity Article de journal

Nat Commun, 12 (1), p. 1859, 2021, ISSN: 2041-1723 (Electronic) 2041-1723 (Linking), (2008/37).

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Dalzon, B; Devcic, J; Bons, J; Torres, A; Diemer, H; Ravanel, S; Collin-Faure, V; Cianferani, S; Carapito, C; Rabilloud, T

A proteomic view of cellular responses of macrophages to copper when added as ion or as copper-polyacrylate complex Article de journal

J Proteomics, 239 , p. 104178, 2021, ISSN: 1876-7737 (Electronic) 1874-3919 (Linking), (2014/29).

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Deffieu, M S; Cesonyte, I; Delalande, F; Boncompain, G; Dorobantu, C; Song, E; Lucansky, V; Hirschler, A; Cianferani, S; Perez, F; Carapito, C; Gaudin, R

Rab7-harboring vesicles are carriers of the transferrin receptor through the biosynthetic secretory pathway Article de journal

Sci Adv, 7 (2), 2021, ISSN: 2375-2548 (Electronic) 2375-2548 (Linking), (Deffieu, Maika S Cesonyte, Ieva Delalande, Francois Boncompain, Gaelle Dorobantu, Cristina Song, Eli Lucansky, Vincent Hirschler, Aurelie Cianferani, Sarah Perez, Franck Carapito, Christine Gaudin, Raphael eng 2021/02/02 06:00 Sci Adv. 2021 Jan 8;7(2). pii: 7/2/eaba7803. doi: 10.1126/sciadv.aba7803. Print 2021 Jan.).

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Delfosse, V; Huet, T; Harrus, D; Granell, M; Bourguet, M; Gardia-Parege, C; Chiavarina, B; Grimaldi, M; Mevel, Le S; Blanc, P; Huang, D; Gruszczyk, J; Demeneix, B; Cianferani, S; Fini, J B; Balaguer, P; Bourguet, W

Mechanistic insights into the synergistic activation of the RXR-PXR heterodimer by endocrine disruptor mixtures Article de journal

Proc Natl Acad Sci U S A, 118 (1), 2021, ISSN: 1091-6490 (Electronic) 0027-8424 (Linking), (2019/06).

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Erb, S; Cianferani, S; Marcoux, J

Hands on Native Mass Spectrometry Analysis of Multi-protein Complexes Article de journal

Methods Mol Biol, 2247 , p. 173-191, 2021, ISSN: 1940-6029 (Electronic) 1064-3745 (Linking), (Erb, Stephane Cianferani, Sarah Marcoux, Julien eng Research Support, Non-U.S. Gov't 2020/12/11 06:00 Methods Mol Biol. 2021;2247:173-191. doi: 10.1007/978-1-0716-1126-5_10.).

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Ghoroghi, S; Mary, B; Larnicol, A; Asokan, N; Klein, A; Osmani, N; Busnelli, I; Delalande, F; Paul, N; Halary, S; Gros, F; Fouillen, L; Haeberle, A M; Royer, C; Spiegelhalter, C; Andre-Gregoire, G; Mittelheisser, V; Detappe, A; Murphy, K; Timpson, P; Carapito, R; Blot-Chabaud, M; Gavard, J; Carapito, C; Vitale, N; Lefebvre, O; Goetz, J G; Hyenne, V

Ral GTPases promote breast cancer metastasis by controlling biogenesis and organ targeting of exosomes Article de journal

Elife, 10 , 2021, ISSN: 2050-084X (Electronic) 2050-084X (Linking), (Ghoroghi, Shima Mary, Benjamin Larnicol, Annabel Asokan, Nandini Klein, Annick Osmani, Nael Busnelli, Ignacio Delalande, Francois Paul, Nicodeme Halary, Sebastien Gros, Frederic Fouillen, Laetitia Haeberle, Anne-Marie Royer, Cathy Spiegelhalter, Coralie Andre-Gregoire, Gwennan Mittelheisser, Vincent Detappe, Alexandre Murphy, Kendelle Timpson, Paul Carapito, Raphael Blot-Chabaud, Marcel Gavard, Julie Carapito, Christine Vitale, Nicolas Lefebvre, Olivier Goetz, Jacky G Hyenne, Vincent eng PLBIO19-291/Institut National Du Cancer ANR-10-INBS-08-03/Agence Nationale de la Recherche ANR-19-CE44-0019/Agence Nationale de la Recherche ANR-11-INBS- 0010/Agence Nationale de la Recherche Exosomics/Canceropole Grand Est Vesmatic/Plan Cancer Exosomics/Region Est England 2021/01/07 06:00 Elife. 2021 Jan 6;10. pii: 61539. doi: 10.7554/eLife.61539.).

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Launay, K; Amalian, J A; Laurent, E; Oswald, L; Ouahabi, Al A; Burel, A; Dufour, F; Carapito, C; Clement, J L; Lutz, J F; Charles, L; Gigmes, D

Precise Alkoxyamine Design to Enable Automated Tandem Mass Spectrometry Sequencing of Digital Poly(phosphodiester)s Article de journal

Angew Chem Int Ed Engl, 60 (2), p. 917-926, 2021, ISSN: 1521-3773 (Electronic) 1433-7851 (Linking), (Launay, Kevin Amalian, Jean-Arthur Laurent, Eline Oswald, Laurence Al Ouahabi, Abdelaziz Burel, Alexandre Dufour, Florent Carapito, Christine Clement, Jean-Louis Lutz, Jean-Francois Charles, Laurence Gigmes, Didier eng Research Support, Non-U.S. Gov't Germany 2020/09/24 06:00 Angew Chem Int Ed Engl. 2021 Jan 11;60(2):917-926. doi: 10.1002/anie.202010171. Epub 2020 Nov 10.).

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Lehot, V; Kuhn, I; Nothisen, M; Erb, S; Kolodych, S; Cianferani, S; Chaubet, G; Wagner, A

Non-specific interactions of antibody-oligonucleotide conjugates with living cells Article de journal

Sci Rep, 11 (1), p. 5881, 2021, ISSN: 2045-2322 (Electronic) 2045-2322 (Linking), (Lehot, Victor Kuhn, Isabelle Nothisen, Marc Erb, Stephane Kolodych, Sergii Cianferani, Sarah Chaubet, Guilhem Wagner, Alain eng England 2021/03/17 06:00 Sci Rep. 2021 Mar 15;11(1):5881. doi: 10.1038/s41598-021-85352-w.).

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Oerum, S; Catala, M; Bourguet, M; Gilet, L; Barraud, P; Cianferani, S; Condon, C; Tisne, C

Structural studies of RNase M5 reveal two-metal-ion supported two-step dsRNA cleavage for 5S rRNA maturation Article de journal

RNA Biol, p. 1-11, 2021, ISSN: 1555-8584 (Electronic) 1547-6286 (Linking), (Oerum, Stephanie Catala, Marjorie Bourguet, Maxime Gilet, Laetitia Barraud, Pierre Cianferani, Sarah Condon, Ciaran Tisne, Carine eng 2021/02/06 06:00 RNA Biol. 2021 Feb 23:1-11. doi: 10.1080/15476286.2021.1885896.).

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Picini, F; Schneider, S; Gavat, O; Jentzsch, Vargas A; Tan, J; Maaloum, M; Strub, J M; Tokunaga, S; Lehn, J M; Moulin, E; Giuseppone, N

Supramolecular Polymerization of Triarylamine-Based Macrocycles into Electroactive Nanotubes Article de journal

J Am Chem Soc, 143 (17), p. 6498-6504, 2021, ISSN: 1520-5126 (Electronic) 0002-7863 (Linking), (Picini, Flavio Schneider, Susanne Gavat, Odile Vargas Jentzsch, Andreas Tan, Junjun Maaloum, Mounir Strub, Jean-Marc Tokunaga, Shoichi Lehn, Jean-Marie Moulin, Emilie Giuseppone, Nicolas eng 2021/04/10 06:00 J Am Chem Soc. 2021 May 5;143(17):6498-6504. doi: 10.1021/jacs.1c00623. Epub 2021 Apr 9.).

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Postic, G; Andreani, J; Marcoux, J; Reys, V; Guerois, R; Rey, J; Mouton-Barbosa, E; Vandenbrouck, Y; Cianferani, S; Burlet-Schiltz, O; Labesse, G; Tuffery, P

Proteo3Dnet: a web server for the integration of structural information with interactomics data Article de journal

Nucleic Acids Res, 2021, ISSN: 1362-4962 (Electronic) 0305-1048 (Linking), (Postic, Guillaume Andreani, Jessica Marcoux, Julien Reys, Victor Guerois, Raphael Rey, Julien Mouton-Barbosa, Emmanuelle Vandenbrouck, Yves Cianferani, Sarah Burlet-Schiltz, Odile Labesse, Gilles Tuffery, Pierre eng England 2021/05/09 06:00 Nucleic Acids Res. 2021 May 8. pii: 6272410. doi: 10.1093/nar/gkab332.).

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Optimized Sample Preparation and Data Processing of Data-Independent Acquisition Methods for the Robust Quantification of Trace-Level Host Cell Protein Impurities in Antibody Drug Products Article de journal

J Proteome Res, 20 (1), p. 923-931, 2021, ISSN: 1535-3907 (Electronic) 1535-3893 (Linking), (Pythoud, Nicolas Bons, Joanna Mijola, Geoffroy Beck, Alain Cianferani, Sarah Carapito, Christine eng Research Support, Non-U.S. Gov't 2020/10/06 06:00 J Proteome Res. 2021 Jan 1;20(1):923-931. doi: 10.1021/acs.jproteome.0c00664. Epub 2020 Oct 4.).

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Schleiss, C; Carapito, R; Fornecker, L M; Muller, L; Paul, N; Tahar, O; Pichot, A; Tavian, M; Nicolae, A; Miguet, L; Mauvieux, L; Herbrecht, R; Cianferani, S; Freund, J N; Carapito, C; Maumy-Bertrand, M; Bahram, S; Bertrand, F; Vallat, L

Temporal multiomic modeling reveals a B-cell receptor proliferative program in chronic lymphocytic leukemia Article de journal

Leukemia, 35 (5), p. 1463-1474, 2021, ISSN: 1476-5551 (Electronic) 0887-6924 (Linking), (Schleiss, Cedric Carapito, Raphael Fornecker, Luc-Matthieu Muller, Leslie Paul, Nicodeme Tahar, Ouria Pichot, Angelique Tavian, Manuela Nicolae, Alina Miguet, Laurent Mauvieux, Laurent Herbrecht, Raoul Cianferani, Sarah Freund, Jean-Noel Carapito, Christine Maumy-Bertrand, Myriam Bahram, Seiamak Bertrand, Frederic Vallat, Laurent eng ANR-11-LABX-0070_Transplantex/Agence Nationale de la Recherche (French National Research Agency) C13055MS/Institut National Du Cancer (French National Cancer Institute) England 2021/04/10 06:00 Leukemia. 2021 May;35(5):1463-1474. doi: 10.1038/s41375-021-01221-5. Epub 2021 Apr 8.).

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Wagner-Rousset, E; Colas, O; Chenu, S; Francois, Y N; Guillarme, D; Cianferani, S; Tsybin, Y O; Sjogren, J; Delobel, A; Beck, A

Fast Afucosylation Profiling of Glycoengineered Antibody Subunits by Middle-Up Mass Spectrometry Article de journal

Methods Mol Biol, 2271 , p. 73-83, 2021, ISSN: 1940-6029 (Electronic) 1064-3745 (Linking), (Wagner-Rousset, Elsa Colas, Olivier Chenu, Stephane Francois, Yannis-Nicolas Guillarme, Davy Cianferani, Sarah Tsybin, Yury O Sjogren, Jonathan Delobel, Arnaud Beck, Alain eng 2021/04/29 06:00 Methods Mol Biol. 2021;2271:73-83. doi: 10.1007/978-1-0716-1241-5_5.).

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Mori, Daiki; Grégoire, Claude; Voisinne, Guillaume; Celis-Gutierrez, Javier; Aussel, Rudy; Girard, Laura; è, Myl; è, Marl; Argenty, Jérémy; Burlet-Schiltz, Odile; Fiore, Frédéric; de Peredo, Anne; Malissen, Marie; Roncagalli, Romain; Malissen, Bernard

The T cell CD6 receptor operates a multitask signalosome with opposite functions in T cell activation. Article de journal

The Journal of experimental medicine, 218 (2), 2021.

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Froment, Carine; Zanolli, Clément; Hourset, Mathilde; Mouton-Barbosa, Emmanuelle; Moreira, Andreia; Burlet-Schiltz, Odile; Mollereau, Catherine

Protein sequence comparison of human and non-human primate tooth proteomes. Article de journal

Journal of proteomics, 231 , p. 104045, 2021.

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è, Hél; Blanckaert, Vincent; Veidl, Brigitte; Burlet-Schiltz, Odile; Pichereaux, Carole; Gargaros, Audrey; Marchand, Justine; î, Beno

Application of pulsed electric fields for the biocompatible extraction of proteins from the microalga Haematococcus pluvialis. Article de journal

Bioelectrochemistry (Amsterdam, Netherlands), 137 , p. 107588, 2021.

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2020

Zhai, Yunhao; Celis-Gutierrez, Javier; Voisinne, Guillaume; Mori, Daiki; Girard, Laura; Burlet-Schiltz, Odile; de Peredo, Anne Gonzalez; Roncagalli, Romain; Malissen, Bernard

Opposing regulatory functions of the TIM3 (HAVCR2) signalosome in primary effector T cells as revealed by quantitative interactomics. Article de journal

Cellular & molecular immunology, 2020.

Liens

Eren, Elif; è, Rémi Plan; Bagayoko, Salimata; Bordignon, Pierre-Jean; Chaoui, Karima; Hessel, Audrey; Santoni, Karin; Pinilla, Miriam; Lagrange, Brice; Burlet-Schiltz, Odile; Howard, Jonathan C; Henry, Thomas; Yamamoto, Masahiro; Meunier, Etienne

Irgm2 and Gate-16 cooperatively dampen Gram-negative bacteria-induced caspase-11 response. Article de journal

EMBO reports, 21 (11), p. e50829, 2020.

Résumé | Liens

Klein, Julie; Caubet, Cécile; è, Myl; Makridakis, Manousos; Denis, Colette; Gilet, Marion; è, Guyl; Rascalou, Simon; Neau, Eric; Garrigues, Luc; du Boullay, Olivier; Mischak, Harald; Monsarrat, Bernard; Burlet-Schiltz, Odile; Vlahou, Antonia; Saulnier-Blache, Jean Sébastien; Bascands, Jean-Loup; Schanstra, Joost P

Connectivity mapping of glomerular proteins identifies dimethylaminoparthenolide as a new inhibitor of diabetic kidney disease. Article de journal

Scientific reports, 10 (1), p. 14898, 2020.

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Bouyssié, D; Hesse, A M; Mouton-Barbosa, E; Rompais, M; Macron, C; Carapito, C; de Peredo, A G; Couté, Y; Dupierris, V; Burel, A; Menetrey, J P; Kalaitzakis, A; Poisat, J; Romdhani, A; Burlet-Schiltz, O; Cianférani, S; Garin, J; Bruley, C

Proline: an efficient and user-friendly software suite for large-scale proteomics Article de journal

Bioinformatics, 36 (10), p. 3148-3155, 2020.

Liens

Pirro, M; Rombouts, Y; Stella, A; Neyrolles, O; Burlet-Schiltz, O; van Vliet, S J; de Ru, A H; Mohammed, Y; Wuhrer, M; van Veelen, P A; Hensbergen, P J

Characterization of Macrophage Galactose-type Lectin (MGL) ligands in colorectal cancer cell lines Article de journal

Biochim Biophys Acta Gen Subj, 1864 (4), p. 129513, 2020.

Liens

Locard-Paulet, Marie; Bouyssié, David; Froment, Carine; Burlet-Schiltz, Odile; Jensen, Lars J

Comparing 22 Popular Phosphoproteomics Pipelines for Peptide Identification and Site Localization. Article de journal

Journal of proteome research, 19 (3), p. 1338–1345, 2020.

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Ibrahim, M; Ayoub, D; Wasselin, T; Dorsselaer, Van A; Maho, Le Y; Raclot, T; Bertile, F

Alterations in rat adipose tissue transcriptome and proteome in response to prolonged fasting Article de journal

Biological Chemistry, 401 (3), p. 389-405, 2020.

Liens

Bonnet, M; Soulat, J; Bons, J; Leger, S; Koning, De L; Carapito, C; Picard, B

Quantification of biomarkers for beef meat qualities using a combination of Parallel Reaction Monitoring- and antibody-based proteomics Article de journal

Food Chem, 317 , p. 126376., 2020.

Liens

Locard-Paulet, M; Bouyssié, D; Froment, C; Burlet-Schiltz, O; Jensen, L J

Comparing 22 Popular Phosphoproteomics Pipelines for Peptide Identification and Site Localization Article de journal

J. Proteome Res., 19 (3), p. 1338–1345, 2020.

Liens

Imbert, C; Montfort, A; Fraisse, M; Marcheteau, E; Gilhodes, J; Martin, E; Bertrand, F; Marcellin, M; Burlet-Schiltz, O; Peredo, A G; Garcia, V; Carpentier, S; Tartare-Deckert, S; Brousset, P; Rochaix, P; Puisset, F; Filleron, T; Meyer, N; Lamant, L; Levade, T; Ségui, B; Andrieu-Abadie, N; Colacios, C

Resistance of melanoma to immune checkpoint inhibitors is overcome by targeting the sphingosine kinase-1 Article de journal

Nat Commun, 11 (1), p. 437, 2020.

Liens

Froment, C; Hourset, M; S?enz-Oyh?r?guy, N; Mouton-Barbosa, E; Willmann, C; Zanolli, C; Esclassan, R; Donat, R; Th?ves, C; Burlet-Schiltz, O; Mollereau, C

Analysis of 5000 year-old human teeth using optimized large-scale and targeted proteomics approaches for detection of sex-specific peptides Article de journal

J Proteomics, 211 , p. 103548, 2020.

Liens

Clement, E; Lazar, I; Attané, C; Carrié, L; Dauvillier, S; Ducoux-Petit, M; Estève, D; Menneteau, T; Moutahir, M; Gonidec, Le S; Dalle, S; Valet, P; Burlet-Schiltz, O; Muller, C; Nieto, L

Adipocyte extracellular vesicles carry enzymes and fatty acids that stimulate mitochondrial metabolism and remodeling in tumor cells Article de journal

EMBO J., 39 (3), p. e102525, 2020.

Liens

Santin, Yohan; Fazal, Loubina; Sainte-Marie, Yannis; Sicard, Pierre; Maggiorani, Damien; Tortosa, Florence; Yücel, Yasemin Yücel; Teyssedre, Lise; Rouquette, Jacques; Marcellin, Marlene; Vindis, Cécile; Shih, Jean C; Lairez, Olivier; Burlet-Schiltz, Odile; Parini, Angelo; Lezoualc'h, Frank; Mialet-Perez, Jeanne

Mitochondrial 4-HNE derived from MAO-A promotes mitoCa(2+) overload in chronic postischemic cardiac remodeling. Article de journal

Cell death and differentiation, 27 (6), p. 1907–1923, 2020.

Résumé | Liens

Froment, Carine; Hourset, Mathilde; Sáenz-Oyhéréguy, Nancy; Mouton-Barbosa, Emmanuelle; Willmann, Claire; Zanolli, Clément; Esclassan, Rémi; Donat, Richard; è, Catherine Th; Burlet-Schiltz, Odile; Mollereau, Catherine

Analysis of 5000 year-old human teeth using optimized large-scale and targeted proteomics approaches for detection of sex-specific peptides. Article de journal

Journal of proteomics, 211 , p. 103548, 2020.

Résumé | Liens

Del Corpo, Daniele ; Fullone, Maria R; Miele, Rossella; ë, Micka; Pontiggia, Daniela; Grisel, Sacha; Kieffer‐Jaquinod, Sylvie; Giardina, Thierry; Bellincampi, Daniela; Lionetti, Vincenzo

AtPME17 is a functional $backslash$textitArabidopsis thaliana pectin methylesterase regulated by its PRO region that triggers PME activity in the resistance to $backslash$textitBotrytis cinerea Article de journal

Molecular Plant Pathology, p. mpp.13002, 2020, ISSN: 1464-6722, 1364-3703.

Liens

Farhat, Dayana C; Swale, Christopher; Dard, Céline; Cannella, Dominique; Ortet, Philippe; Barakat, Mohamed; Sindikubwabo, Fabien; Belmudes, Lucid; De Bock, Pieter-Jan ; Couté, Yohann; Bougdour, Alexandre; Hakimi, Mohamed-Ali

A MORC-driven transcriptional switch controls Toxoplasma developmental trajectories and sexual commitment Article de journal

Nature Microbiology, 2020, ISSN: 2058-5276.

Liens

Di Giovanni, D; Lepetit, D; Guinet, B; Bennetot, B; Boulesteix, M; Couté, Y; Bouchez, O; Ravallec, M; Varaldi, J

A behavior-manipulating virus relative as a source of adaptive genes for Drosophila parasitoids Article de journal

Molecular Biology and Evolution, 2020, ISSN: 1537-1719.

Résumé | Liens

Adhikari, Subash; Nice, Edouard C; Deutsch, Eric W; Lane, Lydie; Omenn, Gilbert S; Pennington, Stephen R; Paik, Young-Ki; Overall, Christopher M; Corrales, Fernando J; Cristea, Ileana M; Van Eyk, Jennifer E; Uhlén, Mathias; Lindskog, Cecilia; Chan, Daniel W; Bairoch, Amos; Waddington, James C; Justice, Joshua L; LaBaer, Joshua; Rodriguez, Henry; He, Fuchu; Kostrzewa, Markus; Ping, Peipei; Gundry, Rebekah L; Stewart, Peter; Srivastava, Sanjeeva; Srivastava, Sudhir; Nogueira, Fabio C S; Domont, Gilberto B; Vandenbrouck, Yves; Lam, Maggie P Y; Wennersten, Sara; Vizcaino, Juan Antonio; Wilkins, Marc; Schwenk, Jochen M; Lundberg, Emma; Bandeira, Nuno; Marko-Varga, Gyorgy; Weintraub, Susan T; Pineau, Charles; Kusebauch, Ulrike; Moritz, Robert L; Ahn, Seong Beom; Palmblad, Magnus; Snyder, Michael P; Aebersold, Ruedi; Baker, Mark S

A high-stringency blueprint of the human proteome Article de journal

Nature Communications, 11 (1), p. 5301, 2020, ISSN: 2041-1723.

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Monestier, Marie; ï, Ana; Lamboux, Aline; Cuillel, Martine; Pignot-Paintrand, Isabelle; Cassio, Doris; Charbonnier, Peggy; Um, Khémary; Harel, Amélie; Bohic, Sylvain; Gateau, Christelle; Balter, Vincent; Brun, Virginie; Delangle, Pascale; Mintz, Elisabeth

A liver-targeting Cu( textlessspan style= Article de journal

Metallomics, p. 10.1039.D0MT00069H, 2020, ISSN: 1756-5901, 1756-591X.

Résumé | Liens

Van Gool, Alain ; Corrales, Fernado; ć, Mirjana {Č}olovi; ć, Danijela Krsti; Oliver-Martos, Begona; Martínez-Cáceres, Eva; Jakasa, Ivone; Gajski, Goran; Brun, Virginie; Kyriacou, Kyriacos; Burzynska-Pedziwiatr, Izabela; Wozniak, Lucyna Alicja; Nierkens, Stephan; Pascual García, César ; Katrlik, Jaroslav; Bojic-Trbojevic, Zanka; Vacek, Jan; Llorente, Alicia; Antohe, Felicia; Suica, Viorel; Suarez, Guillaume; T'Kindt, Ruben; Martin, Petra; Penque, Deborah; Martins, Ines Lanca; Bodoki, Ede; Iacob, Bogdan-Cezar; Aydindogan, Eda; Timur, Suna; Allinson, John; Sutton, Christopher; Luider, Theo; Wittfooth, Saara; Sammar, Marei

Analytical techniques for multiplex analysis of protein biomarkers Article de journal

Expert Review of Proteomics, p. 1–17, 2020, ISSN: 1744-8387.

Résumé | Liens

Couté, Yohann; Bruley, Christophe; Burger, Thomas

Beyond target-decoy competition: stable validation of peptide and protein identifications in mass spectrometry-based discovery proteomics Article de journal

Analytical Chemistry, 2020, ISSN: 1520-6882.

Résumé | Liens

Lacombe, Maud; Jaquinod, Michel; Belmudes, Lucid; Couté, Yohann; Ramus, Claire; Combes, Florence; Burger, Thomas; Mintz, Elisabeth; Barthelon, Justine; Leroy, Vincent; Poujois, Aurélia; Lachaux, Alain; Woimant, France; Brun, Virginie

Comprehensive and comparative exploration of the $backslash$textitAtp7b $^backslashtextrm−/−$ mouse plasma proteome Article de journal

Metallomics, p. 10.1039.C9MT00225A, 2020, ISSN: 1756-5901, 1756-591X.

Résumé | Liens

Jeudy, Sandra; Bertaux, Lionel; Alempic, Jean-Marie; Lartigue, Audrey; Legendre, Matthieu; Belmudes, Lucid; Santini, Sébastien; è, Nad; Beucher, Laure; Biondi, Emanuele G; Juul, Sissel; Turner, Daniel J; Couté, Yohann; Claverie, Jean-Michel; Abergel, Chantal

Exploration of the propagation of transpovirons within Mimiviridae reveals a unique example of commensalism in the viral world Article de journal

The ISME journal, 14 (3), p. 727–739, 2020, ISSN: 1751-7370.

Résumé | Liens

Nguyen, Minh Vu Chuong; ï, Ana; Adrait, Annie; Defendi, Federica; Couté, Yohann; Baillet, Athan; Guigue, Lisa; Gottenberg, Jacques-Eric; Dumestre-Pérard, Chantal; Brun, Virginie; Gaudin, Philippe

Fetuin-A and thyroxin binding globulin predict rituximab response in rheumatoid arthritis patients with insufficient response to anti-TNF$alpha$ Article de journal

Clinical Rheumatology, 2020, ISSN: 1434-9949.

Résumé | Liens

è, Hél; ï, Hélo; Vegna, Serena; Lahlali, Thomas; Pons, Caroline; Michelet, Maud; Couté, Yohann; Belmudes, Lucid; Chadeuf, Gilliane; Kim, Yujin; Di Bernardo, Ariel ; Jalaguier, Pascal; ï, Fran{ç}ois-Lo; Fusil, Floriane; Rivoire, Michel; Arnold, Lee D; Lopatin, Uri; Combet, Christophe; Zoulim, Fabien; Grierson, David; Chabot, Benoit; Lucifora, Julie; Durantel, David; Salvetti, Anna

Hepatitis B virus Core protein nuclear interactome identifies SRSF10 as a host RNA-binding protein restricting HBV RNA production Article de journal

PLoS pathogens, 16 (11), p. e1008593, 2020, ISSN: 1553-7374.

Résumé | Liens

van Lis, Robert; è, Sabine Brugi; Baffert, Carole; Couté, Yohann; Nitschke, Wolfgang; Atteia, Ariane

Hybrid cluster proteins in a photosynthetic microalga Article de journal

The FEBS journal, 287 (4), p. 721–735, 2020, ISSN: 1742-4658.

Résumé | Liens

Adrait, Annie; Dumonceau, Jean-Marc; Delhaye, Myriam; Annessi-Ramseyer, Isabelle; Frossard, Jean-Louis; Coute, Yohann; Farina, Annarita

Liquid Biopsy of Bile based on Targeted Mass Spectrometry for the Diagnosis of Malignant Biliary Strictures Article de journal

Clinical and Translational Science, 2020, ISSN: 1752-8062.

Résumé | Liens

Couté, Yohann; Kraut, Alexandra; Zimmermann, Christine; Büscher, Nicole; Hesse, Anne-Marie; Bruley, Christophe; De Andrea, Marco ; Wangen, Christina; Hahn, Friedrich; Marschall, Manfred; Plachter, Bodo

Mass Spectrometry-Based Characterization of the Virion Proteome, Phosphoproteome, and Associated Kinase Activity of Human Cytomegalovirus Article de journal

Microorganisms, 8 (6), p. 820, 2020, ISSN: 2076-2607.

Résumé | Liens

Crespo, Marion; Damont, Annelaure; Blanco, Melina; Lastrucci, Emmanuelle; Kennani, Sara El; ô, C; Khattabi, Laila El; Terrier, Samuel; Louwagie, Mathilde; Kieffer-Jaquinod, Sylvie; Hesse, Anne-Marie; Bruley, Christophe; Chantalat, Sophie; ô, Jér; ç, Fran; Battail, Christophe; Cocquet, Julie; Pflieger, Delphine

Multi-omic analysis of gametogenesis reveals a novel signature at the promoters and distal enhancers of active genes Article de journal

Nucleic Acids Research, 48 (8), p. 4115–4138, 2020, ISSN: 0305-1048, 1362-4962.

Résumé | Liens

Kloehn, Joachim; Oppenheim, Rebecca D; Siddiqui, Ghizal; De Bock, Pieter-Jan ; Kumar Dogga, Sunil ; Coute, Yohann; Hakimi, Mohamed-Ali; Creek, Darren J; Soldati-Favre, Dominique

Multi-omics analysis delineates the distinct functions of sub-cellular acetyl-CoA pools in Toxoplasma gondii Article de journal

BMC Biology, 18 (1), p. 67, 2020, ISSN: 1741-7007.

Liens

Sansa, Marc; Defoort, Martial; Brenac, Ariel; Hermouet, Maxime; Banniard, Louise; Fafin, Alexandre; Gely, Marc; Masselon, Christophe; Favero, Ivan; Jourdan, Guillaume; Hentz, Sébastien

Optomechanical mass spectrometry Article de journal

Nature Communications, 11 (1), p. 3781, 2020, ISSN: 2041-1723.

Résumé | Liens

Postic, Guillaume; Marcoux, Julien; Reys, Victor; Andreani, Jessica; Vandenbrouck, Yves; Bousquet, Marie-Pierre; Mouton-Barbosa, Emmanuelle; Cianférani, Sarah; Burlet-Schiltz, Odile; Guerois, Raphael; Labesse, Gilles; Tufféry, Pierre

Probing Protein Interaction Networks by Combining MS-Based Proteomics and Structural Data Integration. Article de journal

Journal of proteome research, 19 (7), p. 2807–2820, 2020.

Résumé

Dia, Maya; Gomez, Ludovic; Thibault, Helene; Tessier, Nolwenn; Leon, Christelle; Chouabe, Christophe; Ducreux, Sylvie; Gallo-Bona, Noelle; Tubbs, Emily; Bendridi, Nadia; Chanon, Stephanie; Leray, Aymeric; Belmudes, Lucid; Couté, Yohann; Kurdi, Mazen; Ovize, Michel; Rieusset, Jennifer; Paillard, Melanie

Reduced reticulum–mitochondria Ca2+ transfer is an early and reversible trigger of mitochondrial dysfunctions in diabetic cardiomyopathy Article de journal

Basic Research in Cardiology, 115 (6), p. 74, 2020, ISSN: 0300-8428, 1435-1803.

Résumé | Liens

Began, Jakub; Cordier, Baptiste; Březinová, Jana; Delisle, Jordan; Hexnerová, Rozálie; Srb, Pavel; Rampírová, Petra; ž, Milan Ko; Baudet, Mathieu; Couté, Yohann; Galinier, Anne; Veverka, Václav; Doan, Thierry; Strisovsky, Kvido

Rhomboid intramembrane protease YqgP licenses bacterial membrane protein quality control as adaptor of FtsH textlessspan style= Article de journal

The EMBO Journal, 2020, ISSN: 0261-4189, 1460-2075.

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Lezzerini, Marco; Penzo, Marianna; ç, Marie-Fran; Marques Dos Santos Vieira, Carolina ; Saby, Manon; Elfrink, Hyung L; Diets, Illja J; Hesse, Anne-Marie; Couté, Yohann; Gastou, Marc; Nin-Velez, Alexandra; Nikkels, Peter G J; Olson, Alexandra N; Zonneveld-Huijssoon, Evelien; Jongmans, Marjolijn C J; Zhang, GuangJun; van Weeghel, Michel; Houtkooper, Riekelt H; Wlodarski, Marcin W; Kuiper, Roland P; Bierings, Marc B; van der Werff Ten Bosch, Jutte ; Leblanc, Thierry; Montanaro, Lorenzo; Dinman, Jonathan D; Da Costa, Lydie ; Gleizes, Pierre-Emmanuel; MacInnes, Alyson W

Ribosomal protein gene RPL9 variants can differentially impair ribosome function and cellular metabolism Article de journal

Nucleic Acids Research, 48 (2), p. 770–787, 2020, ISSN: 1362-4962.

Résumé | Liens

Crespo, Marion; Luense, Lacey J; Arlotto, Marie; Jialei, Hu; Dorsey, Jean; Garcia-Oliver, Encar; Shah, Parisha P; Pflieger, Delphine; Berger, Shelley L; ô, Jér

Systematic genetic and proteomic screens during gametogenesis identify H2BK34 methylation as an evolutionary conserved meiotic mark Article de journal

Epigenetics & Chromatin, 13 (35), p. 1–23, 2020.

Liens

Hahn, Friedrich; Niesar, Aischa; Wangen, Christina; Wild, Markus; Grau, Benedikt; Herrmann, Lars; Capci, Aysun; Adrait, Annie; Couté, Yohann; Tsogoeva, Svetlana B; Marschall, Manfred

Target verification of artesunate-related antiviral drugs: assessing the role of mitochondrial and regulatory proteins by click chemistry and fluorescence labeling Article de journal

Antiviral Research, p. 104861, 2020, ISSN: 01663542.

Liens

Vandenbrouck, Yves; Pineau, Charles; Lane, Lydie

The Functionally Unannotated Proteome of Human Male Tissues: A Shared Resource to Uncover New Protein Functions Associated with Reproductive Biology Article de journal

Journal of Proteome Research, 2020, ISSN: 1535-3907.

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Ngo, Tuan-Dung; Perdu, Caroline; Jneid, Bakhos; Ragno, Michel; Novion Ducassou, Julia ; Kraut, Alexandra; Couté, Yohann; Stopford, Charles; Attree, Ina; Rietsch, Arne; Faudry, Eric

The PopN gate-keeper complex acts on the ATPase PscN to regulate the T3SS secretion switch from early to middle substrates in Pseudomonas aeruginosa Article de journal

Journal of Molecular Biology, 2020, ISSN: 0022-2836.

Résumé | Liens

Lamboux, Aline; Couchonnal-Bedoya, Eduardo; Guillaud, Olivier; Laurencin, Chloé; ç, Laurence Lion-Fran; Belmalih, Abdelouahed; Mintz, Elisabeth; Brun, Virginie; Bost, Muriel; Lachaux, Alain; Balter, Vincent

The blood copper isotopic composition is a prognostic indicator of the hepatic injury in Wilson disease Article de journal

Metallomics: Integrated Biometal Science, 2020, ISSN: 1756-591X.

Résumé | Liens

Roblin, Clarisse; Chiumento, Steve; Bornet, Olivier; Nouailler, Matthieu; Müller, Christina S; Jeannot, Katy; Basset, Christian; Kieffer-Jaquinod, Sylvie; Couté, Yohann; Torelli, Stéphane; Le Pape, Laurent ; Schünemann, Volker; Olleik, Hamza; De La Villeon, Bruno ; Sockeel, Philippe; Di Pasquale, Eric ; Nicoletti, Cendrine; Vidal, Nicolas; Poljak, Leonora; Iranzo, Olga; Giardina, Thierry; Fons, Michel; Devillard, Estelle; Polard, Patrice; Maresca, Marc; Perrier, Josette; Atta, Mohamed; ç, Fran; Lafond, Mickael; Duarte, Victor

The unusual structure of Ruminococcin C1 antimicrobial peptide confers clinical properties Article de journal

Proceedings of the National Academy of Sciences of the United States of America, 2020, ISSN: 1091-6490.

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Sokolovska, Nataliya; Permiakova, Olga; Forslund, Sofia K; Zucker, Jean-Daniel

Using Unlabeled Data to Discover Bivariate Causality with Deep Restricted Boltzmann Machines Article de journal

IEEE/ACM transactions on computational biology and bioinformatics, 17 (1), p. 358–364, 2020, ISSN: 1557-9964.

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Allison, T M; Barran, P E; Benesch, J L P; Cianferani, S; Degiacomi, M T; Gabelica, V; Grandori, R; Marklund, E G; Menneteau, T; Migas, L G; Politis, A; Sharon, M; Sobott, F; Thalassinos, K

Software requirements for the analysis and interpretation of native ion mobility mass spectrometry data Article de journal

Anal Chem, 2020, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking), (review, pas de projet LSMBO).

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Allison, T M; Barran, P E; Cianferani, S; Degiacomi, M T; Gabelica, V; Grandori, R; Marklund, E G; Menneteau, T; Migas, L G; Politis, A; Sharon, M; Sobott, F; Thalassinos, K; Benesch, J L P

Computational strategies and challenges for using native ion mobility mass spectrometry in biophysics and structural biology Article de journal

Anal Chem, 2020, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking), (review pas de projet LSMBO).

Liens

Botzanowski, T; Hernandez-Alba, O; Malissard, M; Wagner-Rousset, E; Desligniere, E; Colas, O; Haeuw, J F; Beck, A; Cianferani, S

Middle Level IM-MS and CIU Experiments for Improved Therapeutic Immunoglobulin Subclass Fingerprinting Article de journal

Anal Chem, 92 (13), p. 8827-8835, 2020, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking).

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Castro, C N; Rosenzwajg, M; Carapito, R; Shahrooei, M; Konantz, M; Khan, A; Miao, Z; Gross, M; Tranchant, T; Radosavljevic, M; Paul, N; Stemmelen, T; Pitoiset, F; Hirschler, A; Nespola, B; Molitor, A; Rolli, V; Pichot, A; Faletti, L E; Rinaldi, B; Friant, S; Mednikov, M; Karauzum, H; Aman, M J; Carapito, C; Lengerke, C; Ziaee, V; Eyaid, W; Ehl, S; Alroqi, F; Parvaneh, N; Bahram, S

NCKAP1L defects lead to a novel syndrome combining immunodeficiency, lymphoproliferation, and hyperinflammation Article de journal

J Exp Med, 217 (12), 2020, ISSN: 1540-9538 (Electronic) 0022-1007 (Linking), (????).

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Chabrol, E; Stojko, J; Nicolas, A; Botzanowski, T; Fould, B; Antoine, M; Cianferani, S; Ferry, G; Boutin, J A

VHH characterization.Recombinant VHHs: Production, characterization and affinity Article de journal

Anal Biochem, 589 , p. 113491, 2020, ISSN: 1096-0309 (Electronic) 0003-2697 (Linking).

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Charles, L; Mondal, T; Greff, V; Razzini, M; Monnier, V; Burel, A; Carapito, C; Lutz, J F

Optimal conditions for tandem mass spectrometric sequencing of information-containing nitrogen-substituted polyurethanes Article de journal

Rapid Commun Mass Spectrom, 34 (14), p. e8815, 2020, ISSN: 1097-0231 (Electronic) 0951-4198 (Linking), (????).

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Ciudad, S; Puig, E; Botzanowski, T; Meigooni, M; Arango, A S; Do, J; Mayzel, M; Bayoumi, M; Chaignepain, S; Maglia, G; Cianferani, S; Orekhov, V; Tajkhorshid, E; Bardiaux, B; Carulla, N

Abeta(1-42) tetramer and octamer structures reveal edge conductivity pores as a mechanism for membrane damage Article de journal

Nat Commun, 11 (1), p. 3014, 2020, ISSN: 2041-1723 (Electronic) 2041-1723 (Linking), (2018/12).

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Dovgan, I; Ehkirch, A; Lehot, V; Kuhn, I; Koniev, O; Kolodych, S; Hentz, A; Ripoll, M; Ursuegui, S; Nothisen, M; Cianferani, S; Wagner, A

On the use of DNA as a linker in antibody-drug conjugates: synthesis, stability and in vitro potency Article de journal

Sci Rep, 10 (1), p. 7691, 2020, ISSN: 2045-2322 (Electronic) 2045-2322 (Linking), (2019-05).

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Duivelshof, B L; Desligniere, E; Hernandez-Alba, O; Ehkirch, A; Toftevall, H; Sjogren, J; Cianferani, S; Beck, A; Guillarme, D; D'Atri, V

Glycan-Mediated Technology for Obtaining Homogeneous Site-Specific Conjugated Antibody-Drug Conjugates: Synthesis and Analytical Characterization by Using Complementary Middle-up LC/HRMS Analysis Article de journal

Anal Chem, 92 (12), p. 8170-8177, 2020, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking), (pas de manips au LSMBO).

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Farras, M; Miret, J; Camps, M; Roman, R; Martinez, O; Pujol, X; Erb, S; Ehkirch, A; Cianferani, S; Casablancas, A; Cairo, J J

Homogeneous antibody-drug conjugates: DAR 2 anti-HER2 obtained by conjugation on isolated light chain followed by mAb assembly Article de journal

MAbs, 12 (1), p. 1702262, 2020, ISSN: 1942-0870 (Electronic) 1942-0862 (Linking), (2018/06).

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Hernandez-Alba, O; Ehkirch, A; Beck, A; Cianferani, S

Analysis of ADCs by Native Mass Spectrometry Article de journal

Methods Mol Biol, 2078 , p. 197-211, 2020, ISSN: 1940-6029 (Electronic) 1064-3745 (Linking), (review).

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Humbert, N; Kovalenko, L; Saladini, F; Giannini, A; Pires, M; Botzanowski, T; Cherenok, S; Boudier, C; Sharma, K K; Real, E; Zaporozhets, O A; Cianferani, S; Seguin-Devaux, C; Poggialini, F; Botta, M; Zazzi, M; Kalchenko, V I; Mori, M; Mely, Y

(Thia)calixarenephosphonic Acids as Potent Inhibitors of the Nucleic Acid Chaperone Activity of the HIV-1 Nucleocapsid Protein with a New Binding Mode and Multitarget Antiviral Activity Article de journal

ACS Infect Dis, 6 (4), p. 687-702, 2020, ISSN: 2373-8227 (Electronic) 2373-8227 (Linking).

Résumé | Liens

Kenny, H C; Tascher, G; Ziemianin, A; Rudwill, F; Zahariev, A; Chery, I; Gauquelin-Koch, G; Barielle, M P; Heer, M; Blanc, S; O'Gorman, D J; Bertile, F

Effectiveness of Resistive Vibration Exercise and Whey Protein Supplementation Plus Alkaline Salt on the Skeletal Muscle Proteome Following 21 Days of Bed Rest in Healthy Males Article de journal

J Proteome Res, 19 (8), p. 3438-3451, 2020, ISSN: 1535-3907 (Electronic) 1535-3893 (Linking), (2011/34).

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Laurens, C; Parmar, A; Murphy, E; Carper, D; Lair, B; Maes, P; Vion, J; Boulet, N; Fontaine, C; Marquès, M; Larrouy, D; Harant, I; Thalamas, C; Montastier, E; Caspar-Baugil, S; Bourlier, V; Tavernier, G; Grolleau, J L; Bouloumié, A; Langin, D; Viguerie, N; Bertile, F; Blanc, S; Glisezinski, De I; O’Gorman, D; Moro, C

Growth and differentiation factor 15 is secreted by skeletal muscle during exercise and promotes lipolysis in humans Article de journal

JCI Insight, 5 (6), p. E131870, 2020, (2016/26).

Lefeuvre, B; Cantero, P; Ehret-Sabatier, L; Lenormand, C; Barthel, C; Po, C; Parveen, N; Grillon, A; Jaulhac, B; Boulanger, N

Effects of topical corticosteroids and lidocaine on Borrelia burgdorferi sensu lato in mouse skin: potential impact to human clinical trials Article de journal

Sci Rep, 10 (1), p. 10552, 2020, ISSN: 2045-2322 (Electronic) 2045-2322 (Linking), (2012/30).

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Luu, B E; Lefai, E; Giroud, S; Swenson, J E; Chazarin, B; Gauquelin-Koch, G; Arnemo, J M; Evans, A L; Bertile, F; Storey, K B

MicroRNAs facilitate skeletal muscle maintenance and metabolic suppression in hibernating brown bears Article de journal

J Cell Physiol, 235 (4), p. 3984-3993, 2020, ISSN: 1097-4652 (Electronic) 0021-9541 (Linking), (2011/34).

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Perraud, Q; Cantero, P; Roche, B; Gasser, V; Normant, V P; Kuhn, L; Hammann, P; Mislin, G L A; Ehret-Sabatier, L; Schalk, I J

Phenotypic Adaption of Pseudomonas aeruginosa by Hacking Siderophores Produced by Other Microorganisms Article de journal

Mol Cell Proteomics, 19 (4), p. 589-607, 2020, ISSN: 1535-9484 (Electronic) 1535-9476 (Linking), (2015/28).

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Postic, G; Marcoux, J; Reys, V; Andreani, J; Vandenbrouck, Y; Bousquet, M P; Mouton-Barbosa, E; Cianferani, S; Burlet-Schiltz, O; Guerois, R; Labesse, G; Tuffery, P

Probing Protein Interaction Networks by Combining MS-Based Proteomics and Structural Data Integration Article de journal

J Proteome Res, 19 (7), p. 2807-2820, 2020, ISSN: 1535-3907 (Electronic) 1535-3893 (Linking), (pas de projet, pas de manips au labo).

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Sabou, M; Doderer-Lang, C; Leyer, C; Konjic, A; Kubina, S; Lennon, S; Rohr, O; Viville, S; Cianferani, S; Candolfi, E; Pfaff, A W; Brunet, J

Toxoplasma gondii ROP16 kinase silences the cyclin B1 gene promoter by hijacking host cell UHRF1-dependent epigenetic pathways Article de journal

Cell Mol Life Sci, 77 (11), p. 2141-2156, 2020, ISSN: 1420-9071 (Electronic) 1420-682X (Linking).

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Sornay, C; Hessmann, S; Erb, S; Dovgan, I; Ehkirch, A; Botzanowski, T; Cianferani, S; Wagner, A; Chaubet, G

Investigating Ugi / Passerini multicomponent reactions for the Site-Selective Conjugation of Native Trastuzumab Article de journal

Chemistry, 2020, ISSN: 1521-3765 (Electronic) 0947-6539 (Linking), (2018/30).

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Spenle, C; Loustau, T; Murdamoothoo, D; Erne, W; la Divonne, Beghelli-de Forest S; Veber, R; Petti, L; Bourdely, P; Morgelin, M; Brauchle, E M; Cremel, G; Randrianarisoa, V; Camara, A; Rekima, S; Schaub, S; Nouhen, K; Imhof, T; Hansen, U; Paul, N; Carapito, R; Pythoud, N; Hirschler, A; Carapito, C; Dumortier, H; Mueller, C G; Koch, M; Schenke-Layland, K; Kon, S; Sudaka, A; Anjuere, F; Obberghen-Schilling, Van E; Orend, G

Tenascin-C Orchestrates an Immune-Suppressive Tumor Microenvironment in Oral Squamous Cell Carcinoma Article de journal

Cancer Immunol Res, 2020, ISSN: 2326-6074 (Electronic) 2326-6066 (Linking), (????).

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Tessier, R; Nandi, R K; Dwyer, B G; Abegg, D; Sornay, C; Ceballos, J; Erb, S; Cianferani, S; Wagner, A; Chaubet, G; Adibekian, A; Waser, J

Ethynylation of Cysteine Residues: From Peptides to Proteins in Vitro and in Living Cells Article de journal

Angew Chem Int Ed Engl, 59 (27), p. 10961-10970, 2020, ISSN: 1521-3773 (Electronic) 1433-7851 (Linking).

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Thompson, D; Cognat, V; Goodfellow, M; Koechler, S; Heintz, D; Carapito, C; Dorsselaer, Van A; Mahmoud, H; Sangal, V; Ismail, W

Phylogenomic Classification and Biosynthetic Potential of the Fossil Fuel-Biodesulfurizing Rhodococcus Strain IGTS8 Article de journal

Front Microbiol, 11 , p. 1417, 2020, ISSN: 1664-302X (Print) 1664-302X (Linking), (???).

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Wagner, E; Colas, O; Chenu, S; Goyon, A; Murisier, A; Cianferani, S; Francois, Y; Fekete, S; Guillarme, D; D'Atri, V; Beck, A

Determination of size variants by CE-SDS for approved therapeutic antibodies: Key implications of subclasses and light chain specificities Article de journal

J Pharm Biomed Anal, 184 , p. 113166, 2020, ISSN: 1873-264X (Electronic) 0731-7085 (Linking), (pas de manip MS).

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Wagner-Rousset, E; Colas, O; Francois, Y N; Heinisch, S; Guillarme, D; Cianferani, S; Beck, A

Drug Loading and Distribution of ADCs After Reduction or IdeS Digestion and Reduction Article de journal

Methods Mol Biol, 2078 , p. 187-195, 2020, ISSN: 1940-6029 (Electronic) 1064-3745 (Linking), (pas de manip MS LSMBO).

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Bonnet, M; Soulat, J; Bons, J; Leger, S; Koning, De L; Carapito, C; Picard, B

Quantification of biomarkers for beef meat qualities using a combination of Parallel Reaction Monitoring- and antibody-based proteomics Article de journal

Food Chem, 317 , p. 126376, 2020, ISSN: 1873-7072 (Electronic) 0308-8146 (Linking), (???).

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Ibrahim, M; Ayoub, D; Wasselin, T; Dorsselaer, Van A; Maho, Le Y; Raclot, T; Bertile, F

Alterations in rat adipose tissue transcriptome and proteome in response to prolonged fasting. Article de journal

Biological Chemistry, 401 (3), p. 389-405, 2020, (2009/41).

Belorusova, A Y; Bourguet, M; Hessmann, S; Chalhoub, S; Kieffer, B; Cianferani, S; Rochel, N

Molecular determinants of MED1 interaction with the DNA bound VDR-RXR heterodimer Article de journal

Nucleic Acids Res, 48 (19), p. 11199-11213, 2020, ISSN: 1362-4962 (Electronic) 0305-1048 (Linking), (Belorusova, Anna Y Bourguet, Maxime Hessmann, Steve Chalhoub, Sandra Kieffer, Bruno Cianferani, Sarah Rochel, Natacha eng Research Support, Non-U.S. Gov't England 2020/09/30 06:00 Nucleic Acids Res. 2020 Nov 4;48(19):11199-11213. doi: 10.1093/nar/gkaa775.).

Résumé | Liens

Bernard, Q; Grillon, A; Lenormand, C; Ehret-Sabatier, L; Boulanger, N

Skin Interface, a Key Player for Borrelia Multiplication and Persistence in Lyme Borreliosis Article de journal

Trends Parasitol, 36 (3), p. 304-314, 2020, ISSN: 1471-5007 (Electronic) 1471-4922 (Linking), (2012/30).

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Boyer, C; Cussonneau, L; Brun, C; Deval, C; de Barros, Pais J P; Chanon, S; Bernoud-Hubac, N; Daira, P; Evans, A L; Arnemo, J M; Swenson, J E; Gauquelin-Koch, G; Simon, C; Blanc, S; Combaret, L; Bertile, F; Lefai, E

Specific shifts in the endocannabinoid system in hibernating brown bears Article de journal

Front Zool, 17 (1), p. 35, 2020, ISSN: 1742-9994 (Print) 1742-9994 (Linking), (2011/34).

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Dalzon, B; Aude-Garcia, C; Diemer, H; Bons, J; Marie-Desvergne, C; Perard, J; Dubosson, M; Collin-Faure, V; Carapito, C; Sanglier-Cianferani, S; Carriere, M; Rabilloud, T

The longer the worse: a combined proteomic and targeted study of the long-termversusshort-term effects of silver nanoparticles on macrophages Article de journal

Environmental Science-Nano, 7 (7), p. 2032-2046, 2020, ISSN: 2051-8153, (2014/29).

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Desligniere, E; Ehkirch, A; Botzanowski, T; Beck, A; Hernandez-Alba, O; Cianferani, S

Toward Automation of Collision-Induced Unfolding Experiments through Online Size Exclusion Chromatography Coupled to Native Mass Spectrometry Article de journal

Anal Chem, 92 (19), p. 12900-12908, 2020, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking), (Desligniere, Evolene Ehkirch, Anthony Botzanowski, Thomas Beck, Alain Hernandez-Alba, Oscar Cianferani, Sarah eng Research Support, Non-U.S. Gov't 2020/09/05 06:00 Anal Chem. 2020 Oct 6;92(19):12900-12908. doi: 10.1021/acs.analchem.0c01426. Epub 2020 Sep 18.).

Résumé | Liens

Ibrahim, M; Wasselin, T; Challet, E; Dorsselaer, Van A; Maho, Le Y; Raclot, T; Bertile, F

Transcriptional Changes Involved in Atrophying Muscles during Prolonged Fasting in Rats Article de journal

Int J Mol Sci, 21 (17), 2020, ISSN: 1422-0067 (Electronic) 1422-0067 (Linking), (Ibrahim, Marianne Wasselin, Thierry Challet, Etienne Van Dorsselaer, Alain Le Maho, Yvon Raclot, Thierry Bertile, Fabrice eng ANR-05-BLAN-0069/Agence Nationale de la Recherche ANR-10-INSB-08-03/Proteomics French Infrastructure (ProFI) Switzerland 2020/08/23 06:00 Int J Mol Sci. 2020 Aug 20;21(17). pii: ijms21175984. doi: 10.3390/ijms21175984.).

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Lacoux, C; Wacheul, L; Saraf, K; Pythoud, N; Huvelle, E; Figaro, S; Graille, M; Carapito, C; Lafontaine, D L J; Heurgue-Hamard, V

The catalytic activity of the translation termination factor methyltransferase Mtq2-Trm112 complex is required for large ribosomal subunit biogenesis Article de journal

Nucleic Acids Res, 48 (21), p. 12310-12325, 2020, ISSN: 1362-4962 (Electronic) 0305-1048 (Linking), (Lacoux, Caroline Wacheul, Ludivine Saraf, Kritika Pythoud, Nicolas Huvelle, Emmeline Figaro, Sabine Graille, Marc Carapito, Christine Lafontaine, Denis L J Heurgue-Hamard, Valerie eng Research Support, Non-U.S. Gov't England 2020/11/10 06:00 Nucleic Acids Res. 2020 Dec 2;48(21):12310-12325. doi: 10.1093/nar/gkaa972.).

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Launay, K; Amalian, J A; Laurent, E; Oswald, L; Ouahabi, Al A; Burel, A; Dufour, F; Carapito, C; Clement, J L; Lutz, J F; Charles, L; Gigmes, D

Precise Alkoxyamine Design to Enable Automated Tandem Mass Spectrometry Sequencing of Digital Poly(phosphodiester)s Article de journal

Angew Chem Int Ed Engl, 2020, ISSN: 1521-3773 (Electronic) 1433-7851 (Linking), (Launay, Kevin Amalian, Jean-Arthur Laurent, Eline Oswald, Laurence Al Ouahabi, Abdelaziz Burel, Alexandre Dufour, Florent Carapito, Christine Clement, Jean-Louis Lutz, Jean-Francois Charles, Laurence Gigmes, Didier eng ANR-16-CE29-0004-01/Agence Nationale de la Recherche ANR-16-CE29-0004-02/Agence Nationale de la Recherche Germany 2020/09/24 06:00 Angew Chem Int Ed Engl. 2020 Sep 22. doi: 10.1002/anie.202010171.).

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Nguyen, A; Nguyen, D; Nguyen, Phong T X; Sebastiani, M; Dorr, S; Hernandez-Alba, O; Debaene, F; Cianferani, S; Heine, A; Klebe, G; Reuter, K

The Importance of Charge in Perturbing the Aromatic Glue Stabilizing the Protein-Protein Interface of Homodimeric tRNA-Guanine Transglycosylase Article de journal

ACS Chem Biol, 15 (11), p. 3021-3029, 2020, ISSN: 1554-8937 (Electronic) 1554-8929 (Linking), (Nguyen, Andreas Nguyen, Dzung Phong Nguyen, Tran Xuan Sebastiani, Maurice Dorr, Stefanie Hernandez-Alba, Oscar Debaene, Francois Cianferani, Sarah Heine, Andreas Klebe, Gerhard Reuter, Klaus eng Research Support, Non-U.S. Gov't 2020/11/10 06:00 ACS Chem Biol. 2020 Nov 20;15(11):3021-3029. doi: 10.1021/acschembio.0c00700. Epub 2020 Nov 9.).

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