ProFi Achievements

Publications

533 Entrées « 2 de 6 »

2018

Lacombe, Maud; Marie-Desvergne, Caroline; Combes, Florence; Kraut, Alexandra; Bruley, Christophe; Vandenbrouck, Yves; Mossuz, Véronique Chamel; Couté, Yohann; Brun, Virginie

Proteomic characterization of human exhaled breath condensate Article de journal

Journal of Breath Research, 12 (2), p. 021001, 2018, ISSN: 1752-7163.

Résumé | Liens

Grzela, R; Nusbaum, J; Fieulaine, S; Lavecchia, F; Desmadril, M; Nhiri, N; Van Dorsselaer, A; Cianférani, S; Jacquet, E; Meinnel, T; Giglione, C

Peptide deformylases from Vibrio parahaemolyticus phage and bacteria display similar deformylase activity and inhibitor binding clefts Article de journal

Biochim Biophys Acta., 1866 (2), p. 348-355, 2018.

Liens

A, Métais; I, Lamsoul; A, Melet; S, Uttenweiler-Joseph; R, Poincloux; S, Stefanovic; A, Valière; de A, Gonzalez Peredo; A, Stella; O, Burlet-Schiltz; S, Zaffran; PG, Lutz; C, Moog-Lutz

Asb2α-Filamin A Axis Is Essential for Actin Cytoskeleton Remodeling During Heart Development Article de journal

Circ Res., 122 (6), p. 34-48, 2018.

Liens

Mori, M; Kovalenko, L; Malancona, S; Saladini, F; Forni, De D; Pires, M; Humbert, N; Real, E; Botzanowski, T; Cianférani, S; Giannini, A; Lang, MC. Dasso; Cugia, G; Poddesu, B; Lori, F; Zazzi, M; Harper, S; Summa, V; Mely, Y; Botta, M

Structure-Based Identification of HIV-1 Nucleocapsid Protein Inhibitors Active against Wild-Type and Drug-Resistant HIV-1 Strains Article de journal

ACS Chem Biol., 13 (1), p. 253-266, 2018.

Liens

Husson, G; Delangle, A; O'Hara, J; Cianférani, S; Gervais, A; Van Dorsselaer, A; Bracewell, D; Carapito, C

Dual Data-Independent Acquisition Approach Combining Global HCP Profiling and Absolute Quantification of Key Impurities during Bioprocess Development Article de journal

Anal Chem., 90 (2), p. 1241-1247, 2018.

Liens

L, Favre; A, Ortalo-Magné; C, Pichereaux; A, Gargaros; O, Burlet-Schiltz; V, Cotelle; G., Culioli

Metabolome and proteome changes between biofilm and planktonic phenotypes of the marine bacterium Pseudoalteromonas lipolytica TC8 Article de journal

Biofouling, 34 (2), p. 132-148, 2018.

Liens

Rayapuram, Naganand; Bigeard, Jean; Alhoraibi, Hanna; Bonhomme, Ludovic; Hesse, Anne-Marie; Vinh, Joëlle; Hirt, Heribert; Pflieger, Delphine

Quantitative Phosphoproteomic Analysis Reveals Shared and Specific Targets ofArabidopsisMitogen-Activated Protein Kinases (MAPKs) MPK3, MPK4, and MPK6 Article de journal

Molecular & cellular proteomics: MCP, 17 (1), p. 61–80, 2018, ISSN: 1535-9484.

Résumé | Liens

Burger, Thomas

Gentle Introduction to the Statistical Foundations of False Discovery Rate in Quantitative Proteomics Article de journal

Journal of Proteome Research, 17 (1), p. 12–22, 2018, ISSN: 1535-3907.

Résumé | Liens

Kennani, Sara El; Crespo, Marion; Govin, Jérôme; Pflieger, Delphine

Proteomic Analysis of Histone Variants and Their PTMs: Strategies and Pitfalls Article de journal

Proteomes, 6 (3), 2018, ISSN: 2227-7382.

Résumé | Liens

Kennani, Sara El; Adrait, Annie; Permiakova, Olga; Hesse, Anne-Marie; Ialy-Radio, Côme; Ferro, Myriam; Brun, Virginie; Cocquet, Julie; Govin, Jérôme; Pflieger, Delphine

Systematic quantitative analysis of Ħ2A and Ħ2B variants by targeted proteomics Article de journal

Epigenetics & Chromatin, 11 (1), p. 2, 2018, ISSN: 1756-8935.

Résumé | Liens

Adam, Céline; Guérois, Raphaël; Citarella, Anna; Verardi, Laura; Adolphe, Florine; Béneut, Claire; Sommermeyer, Vérane; Ramus, Claire; Govin, Jérôme; Couté, Yohann; Borde, Valérie

The PHD finger protein Spp1 has distinct functions in the Set1 and the meiotic DSB formation complexes Article de journal

PLoS genetics, 14 (2), p. e1007223, 2018, ISSN: 1553-7404.

Résumé | Liens

Muyt, Arnaud De; Pyatnitskaya, Alexandra; Andréani, Jessica; Ranjha, Lepakshi; Ramus, Claire; Laureau, Raphaëlle; Fernandez-Vega, Ambra; Holoch, Daniel; Girard, Elodie; Govin, Jérome; Margueron, Raphaël; Couté, Yohann; Cejka, Petr; Guérois, Raphaël; Borde, Valérie

A meiotic XPF-ERCC1-like complex recognizes joint molecule recombination intermediates to promote crossover formation Article de journal

Genes & Development, 32 (3-4), p. 283–296, 2018, ISSN: 1549-5477.

Résumé | Liens

Petosa, Carlo; Govin, Jérôme; Mietton, Flore

[A new hope to fight invasive fungal infection] Article de journal

Medecine Sciences: M/S, 34 (2), p. 123–125, 2018, ISSN: 1958-5381.

Liens

Garnaud, Cécile; García-Oliver, Encar; Wang, Yan; Maubon, Danièle; Bailly, Sébastien; Despinasse, Quentin; Champleboux, Morgane; Govin, Jérôme; Cornet, Muriel

The Rim Pathway Mediates Antifungal Tolerance in Candida albicans through Newly Identified Rim101 Transcriptional Targets, Including Hsp90 and Ipt1 Article de journal

Antimicrobial Agents and Chemotherapy, 62 (3), 2018, ISSN: 1098-6596.

Résumé | Liens

He, Huan; Brenier-Pinchart, Marie-Pierre; Braun, Laurence; Kraut, Alexandra; Touquet, Bastien; Couté, Yohann; Tardieux, Isabelle; Hakimi, Mohamed-Ali; Bougdour, Alexandre

Characterization of a Toxoplasma effector uncovers an alternative GSK3/β-catenin-regulatory pathway of inflammation Article de journal

eLife, 7 , 2018, ISSN: 2050-084X.

Résumé | Liens

Picard, Marion A L; Cosseau, Celine; Ferré, Sabrina; Quack, Thomas; Grevelding, Christoph G; Couté, Yohann; Vicoso, Beatriz

Evolution of gene dosage on the Z-chromosome of schistosome parasites Article de journal

eLife, 7 , 2018, ISSN: 2050-084X.

Résumé | Liens

Legendre, Matthieu; Fabre, Elisabeth; Poirot, Olivier; Jeudy, Sandra; Lartigue, Audrey; Alempic, Jean-Marie; Beucher, Laure; Philippe, Nadège; Bertaux, Lionel; Christo-Foroux, Eugène; Labadie, Karine; Couté, Yohann; Abergel, Chantal; Claverie, Jean-Michel

Diversity and evolution of the emerging Pandoraviridae family Article de journal

Nature Communications, 9 (1), p. 2285, 2018, ISSN: 2041-1723.

Résumé | Liens

Eymard-Vernain, Elise; Couté, Yohann; Adrait, Annie; Rabilloud, Thierry; Sarret, Géraldine; Lelong, Cécile

The poly-gamma-glutamate of Bacillus subtilis interacts specifically with silver nanoparticles Article de journal

PloS One, 13 (5), p. e0197501, 2018, ISSN: 1932-6203.

Résumé | Liens

Abulfaraj, Aala A; Mariappan, Kiruthiga; Bigeard, Jean; Manickam, Prabhu; Blilou, Ikram; Guo, Xiujie; Al-Babili, Salim; Pflieger, Delphine; Hirt, Heribert; Rayapuram, Naganand

The Arabidopsis homolog of human G3BP1 is a key regulator of stomatal and apoplastic immunity Article de journal

Life Science Alliance, 1 (2), p. e201800046, 2018, ISSN: 2575-1077.

Résumé | Liens

Sage, Eric; Sansa, Marc; Fostner, Shawn; Defoort, Martial; Gély, Marc; Naik, Akshay K; Morel, Robert; Duraffourg, Laurent; Roukes, Michael L; Alava, Thomas; Jourdan, Guillaume; Colinet, Eric; Masselon, Christophe; Brenac, Ariel; Hentz, Sébastien

Single-particle mass spectrometry with arrays of frequency-addressed nanomechanical resonators Article de journal

Nature Communications, 9 (1), p. 3283, 2018, ISSN: 2041-1723.

Résumé | Liens

Berthier, A; Vinod, M; Porez, G; Steenackers, A; Alexandre, J; Yamakawa, N; Gheeraert, C; Ploton, M; Maréchal, X; Dubois-Chevalier, J; Hovasse, A; Schaeffer-Reiss, C; Cianférani, S; Rolando, C; Bray, F; Duez, H; Eeckhoute, J; Lefebvre, T; Staels, B; Lefebvre, P

Combinatorial regulation of hepatic cytoplasmic signaling and nuclear transcriptional events by the OGT/REV-ERBα complex. Article de journal

Proc Natl Acad Sci U S A., 15 (47), p. E11033-E11042., 2018.

Liens

Bibi-Triki, S; Husson, G; Maucourt, B; Vuilleumier, S; Carapito, C; Bringel, F

N-terminome and proteogenomic analysis of the Methylobacterium extorquens DM4 reference strain for dichloromethane utilization. Article de journal

J Proteomics., (179), p. 131-139, 2018.

Boeuf, A; Schnell, G; Bernard, Q; Kern, A; Westermann, B; Ehret-Sabatier, L; Grillon, A; Schramm, F; Jaulhac, B; Boulanger, N

Dissociating effect of salivary gland extract from Ixodes ricinus on human fibroblasts: Potential impact on Borrelia transmission. Article de journal

Ticks Tick Borne Dis., pii: S1877-959X(18)30014-1. , 2018, (2012/29).

Carapito, R; Carapito, C; Morlon, A; Paul, N; Jacome, AS. Vaca; Alsaleh, G; Rolli, V; Tahar, O; Aouadi, I; Rompais, M; Delalande, F; Pichot, A; Georgel, P; Messer, L; Sibilia, J; Cianferani, S; Dorsselaer, Van A; Bahram, S

Multi-OMICS analyses unveil STAT1 as a potential modifier gene in mevalonate kinase deficiency. Article de journal

Ann Rheum Dis., 77 (11), p. 1675-1687., 2018.

Cavallo, G; Poyer, S; Amalian, JA.; Dufour, F; Burel, A; Carapito, C; Charles, L; Lutz, JF.

Cleavable Binary Dyads: Simplifying Data Extraction and Increasing Storage Density in Digital Polymers. Article de journal

Angew Chem Int Ed Engl., 57 (21), p. 6266-6269., 2018.

Chanon, S; Chazarin, B; Toubhans, B; Durand, C; Chery, I; Robert, M; Vieille-Marchiset, A; Swenson, J E; Zedrosser, A; Evans, A L; Brunberg, S; Arnemo, J M; Gauquelin-Koch, G; Storey, K B; Simon, C; Blanc, S; Bertile, F; Lefai, E

Proteolysis inhibition by hibernating bear serum leads to increased protein content in human muscle cells Article de journal

Sci Rep 2018, 8 (1), p. 5525, 2018, (2011/34).

Liens

Chopard, C; Tong, PBV.; Tóth, P; Schatz, M; Yezid, H; Debaisieux, S; Mettling, C; Gross, A; Pugnière, M; Tu, A; Strub, JM.; Mesnard, JM.; Vitale, N; Beaumelle, B

Cyclophilin A enables specific HIV-1 Tat palmitoylation and accumulation in uninfected cells. Article de journal

Nat Commun., 2018, (2006/01).

Coulter, ME.; Dorobantu, CM.; Lodewijk, GA.; Delalande, F; Cianferani, S; Ganesh, VS.; Smith, RS.; Lim, ET.; Xu, CS.; Pang, S; Wong, ET.; Lidov, HGW.; Calicchio, ML.; Yang, E; Gonzalez, DM.; Schlaeger, TM.; Mochida, GH.; Hess, H; Lee, WA.; Lehtinen, MK.; Kirchhausen, T; Haussler, D; Jacobs, FMJ.; Gaudin, R; Walsh, CA.

The ESCRT-III Protein CHMP1A Mediates Secretion of Sonic Hedgehog on a Distinctive Subtype of Extracellular Vesicles. Article de journal

Cell Rep., 24 (4), p. 973-986.e8., 2018.

Criscuolo, F; Sorci, G; Behaim-Delarbre, M; Zahn, S; Faivre, B; Bertile, F

Age-related response to an acute innate immune challenge in mice: proteomics reveals a telomere maintenance-related cost. Article de journal

Proceedings of the Royal Society B, 285 , p. 20181877., 2018, (2012/28).

Dartevelle, P; Ehlinger, C; Zaet, A; Boehler, C; Rabineau, M; Westermann, B; Strub, JM.; Cianferani, S; Haïkel, Y; Metz-Boutigue, MH.; Marban, C

D-Cateslytin: a new antifungal agent for the treatment of oral Candida albicans associated infections. Article de journal

Sci Rep., 8 (1), p. 9235., 2018, (2009/25).

D'Atri, V; Causon, T; Hernandez-Alba, O; Mutabazi, A; Veuthey, JL.; Cianferani, S; Guillarme, D

Adding a new separation dimension to MS and LC-MS: What is the utility of ion mobility spectrometry? Article de journal

J Sep Sci., 41 (1), p. 20-67., 2018, (0 (review)).

Desplancq, D; Groysbeck, N; Chiper, M; Weiss, E; Frisch, B; Strub, JM.; Cianférani, S; Zafeiratos, S; Moeglin, E; Holy, X; a.L. Favier,; Decarlo, S; Schultz, P; Spehner, D; Zuber, G

Cytosolic Diffusion and Peptide-assisted Nuclear Shuttling of Peptide-substituted circa 102 Gold Atom Nanoclusters in Living Cells Article de journal

ACS Applied Nano Materials, 1 , p. 4236-4246, 2018, (2018/02).

Dovgan, I; Erb, S; Hessmann, S; Ursuegui, S; Michel, C; Muller, C; Chaubet, G; Cianférani, S; Wagner, A

Arginine-selective bioconjugation with 4-azidophenyl glyoxal: application to the single and dual functionalisation of native antibodies. Article de journal

Org Biomol Chem., in press (Feb 1. doi: 10.1039/c7ob02844j.), 2018, (2017/21).

Ehkirch, A; D'Atri, V; Rouvière, F; Hernandez-Alba, O; Goyon, A; Colas, O; Sarrut, M; Beck, A; Guillarme, D; Heinisch, S; Cianférani, S

An online four-dimensional HICxSEC-IMxMS methodology for proof-of-concept characterization of antibody drug conjugates. Article de journal

Anal Chem., 90 (3), p. 1578-1586., 2018.

Ehkirch, A; Goyon, A; Hernandez-Alba, O; Rouviere, F; D'Atri, V; Dreyfus, C; Haeuw, JF.; Diemer, H; Beck, A; Heinisch, S; Guillarme, D; Cianferani, S

A Novel Online Four-Dimensional SEC×SEC-IM×MS Methodology for Characterization of Monoclonal Antibody Size Variants. Article de journal

Anal Chem., Anal Chem. 2018 Nov 12. , p. doi: 10.1021/acs.analchem.8b03333., 2018, (2017/12).

Ehkirch, A; Hernandez-Alba, O; Colas, O; Beck, A; Guillarme, D; Cianférani, S

Hyphenation of size exclusion chromatography to native ion mobility mass spectrometry for the analytical characterization of therapeutic antibodies and related products. Article de journal

J Chromatogr B Analyt Technol Biomed Life Sci., (1086), p. 176-183., 2018, (2016/14).

Ehrmann, FR.; Kalim, J; Pfaffeneder, T; Bernet, B; Hohn, C; Schäfer, E; Botzanowski, T; Cianférani, S; Heine, A; Reuter, K; Diederich, F; Klebe, G

Swapping Interface Contacts in the Homodimeric tRNA Guanine Transglycosylase: An Option for Functional Regulation. Article de journal

Angew Chem Int Ed Engl., 57 (32), p. 10085-10090., 2018, (2007/53).

Garcia, L; Girod, M; Rompais, M; Dugourd, P; Carapito, C; Lemoine, J

Data-Independent Acquisition Coupled to Visible Laser-Induced Dissociation at 473 nm (DIA-LID) for Peptide-Centric Specific Analysis of Cysteine-Containing Peptide Subset. Article de journal

Anal Chem., 90 (6), p. 3928-3935., 2018.

Giroud, S; Evans, AL.; Chery, I; Bertile, F; Tascher, G; Bertrand-Michel, J; Gauquelin-Koch, G; Arnemo, JM.; Swenson, JE.; Lefai, E; Blanc, S; Simon, C

Seasonal changes in eicosanoid metabolism in the brown bear. Article de journal

Naturwissenschaften, 105 (9-10), p. 58, 2018, (2011/34).

Grzela, R; Nusbaum, J; Fieulaine, S; Lavecchia, F; Desmadril, M; Nhiri, N; Dorsselaer, Van A; Cianferani, S; Jacquet, E; Meinnel, T; Giglione, C

Peptide deformylases from Vibrio parahaemolyticus phage and bacteria display similar deformylase activity and inhibitor binding clefts. Article de journal

Biochim Biophys Acta., 1866 (2), p. 348-355., 2018.

Henri, J; Chagot, ME.; Bourguet, M; Abel, Y; Terral, G; Maurizy, C; Aigueperse, C; Georgescauld, F; Vandermoere, F; Saint-Fort, R; Behm-Ansmant, I; Charpentier, B; Pradet-Balade, B; Verheggen, C; Bertrand, E; Meyer, P; Cianférani, S; Manival, X; Quinternet, M

Deep Structural Analysis of RPAP3 and PIH1D1, Two Components of the HSP90 Co-chaperone R2TP Complex. Article de journal

Structure, 26 (9), p. 1196-1209.e8., 2018.

Hernandez-Alba, O; Wagner-Rousset, E; Beck, A; Cianférani, S

Native Mass Spectrometry, Ion Mobility, and Collision-Induced Unfolding for Conformational Characterization of IgG4 Monoclonal Antibodies. Article de journal

Anal Chem., 90 (15), p. 8865-8872., 2018.

Husson, G; Delangle, A; O'Hara, J; Cianferani, S; Gervais, A; Dorsselaer, Van A; Bracewell, D; Carapito, C

Dual Data-Independent Acquisition Approach Combining Global HCP Profiling and Absolute Quantification of Key Impurities during Bioprocess Development. Article de journal

Anal Chem., 90 (2), p. 1241-1247., 2018.

Issa, N; Guillaumot, N; Lauret, E; Matt, N; Schaeffer-Reiss, C; Dorsselaer, Van A; Reichhart, J M; Veillard, F

The Circulating Protease Persephone Is an Immune Sensor for Microbial Proteolytic Activities Upstream of the Drosophila Toll Pathway Article de journal

Mol Cell, 69 (4), p. 539-550 e6., 2018, (2014/10).

Koniev, O; Dovgan, I; Renoux, B; Ehkirch, A; Eberova, J; S., Cianférani; Kolodych, S; Papot, S; Wagner, A

Reduction-rebridging strategy for the preparation of ADPN-based antibody-drug conjugates. Article de journal

Medchemcomm., 9 (5), p. 827-830., 2018.

Maurizy, C; Quinternet, M; Abel, Y; Verheggen, C; Santo, PE.; Bourguet, M; Paiva, A; Bragantini, B; Chagot, ME.; Robert, MC.; Abeza, C; Fabre, P; Fort, P; Vandermoere, F; Sousa, P; Rain, JC.; Charpentier, B; Cianférani, S; Bandeiras, TM.; Pradet-Balade, B; Manival, X; Bertrand, E

The RPAP3-Cterminal domain identifies R2TP-like quaternary chaperones. Article de journal

Nat Commun., 9 (1), p. 2093., 2018.

Mons, C; Botzanowski, T; Nikolaev, A; Hellwig, P; Cianférani, S; Lescop, E; Bouton, C; Golinelli-Cohen, MP.

The H2O2-Resistant Fe-S Redox Switch MitoNEET Acts as a pH Sensor To Repair Stress-Damaged Fe-S Protein. Article de journal

Biochemistry, 57 (38), p. 5616-5628., 2018.

Mori, M; Kovalenko, L; Malancona, S; Saladini, F; Forni, De D; Pires, M; Humbert, N; Real, E; Botzanowski, T; Cianférani, S; Giannini, A; Lang, MC. Dasso; Cugia, G; Poddesu, B; Lori, F; Zazzi, M; Harper, S; Summa, V; Mely, Y; Botta, M

Structure-Based Identification of HIV-1 Nucleocapsid Protein Inhibitors Active against Wild-Type and Drug-Resistant HIV-1 Strains. Article de journal

ACS Chem Biol., 13 (1), p. 253-266., 2018.

Muller, L; Fornecker, L; Chion, M; Dorsselaer, Van A; Cianférani, S; Rabilloud, T; Carapito, C

Extended investigation of tube-gel sample preparation: a versatile and simple choice for high throughput quantitative proteomics. Article de journal

Sci Rep., 8 (1), p. 8260, 2018, (2015/08).

Ploton, M; Mazuy, C; Gheeraert, C; Dubois, V; Berthier, A; Chevalier-Dubois, J; Diemer, H; Cianférani, S; Strub, JM.; Helleboid-Chapman, A; Eeckhoute, J; Staels, B; Lefebvre, P

The Nuclear Bile Acid Receptor FXR is a PKA- and FOXA2-Sensitive Activator of Fasting Hepatic Gluconeogenesis Article de journal

Journal of Hepatology, 2018, (2011/30).

Prudent, R; Demoncheaux, N; Diemer, H; Collin-Faure, V; Kapur, R; Paublant, F; Lafanechère, L; Cianférani, S; Rabilloud, T

A quantitative proteomic analysis of cofilin phosphorylation in myeloid cells and its modulation using the LIM kinase inhibitor Pyr1. Article de journal

PLoS One., 13 (12), p. e0208979., 2018.

Salaam, J; Tabti, L; Bahamyirou, S; Lecointre, A; Alba, Hernandez O; Jeannin, O; Camerel, F; Cianférani, S; Bentouhami, E; Nonat, AM.; Charbonnière, LJ.

Formation of Mono- and Polynuclear Luminescent Lanthanide Complexes based on the Coordination of Preorganized Phosphonated Pyridines. Article de journal

Inorg Chem., 57 (10), p. 6095-6106., 2018.

Tascher, G; Gerbaix, M; Maes, P; Chazarin, B; Ghislin, S; Antropova, E; Vassilieva, G; Ouzren-Zarhloul, N; Gauquelin-Koch, G; Vico, L; Frippiat, JP.; Bertile, F

Analysis of femurs from mice embarked on board BION-M1 biosatellite reveals a decrease in immune cell development, including B cells, after 1 wk of recovery on Earth. Article de journal

FASEB J., Dec 6:fj201801463R. , 2018.

van Tran, N; Muller, L; Ross, RL.; Lestini, R; Létoquart, J; Ulryck, N; Limbach, PA.; de Crécy-Lagard, V; Cianférani, S; Graille, M

Evolutionary insights into Trm112-methyltransferase holoenzymes involved in translation between archaea and eukaryotes. Article de journal

Nucleic Acids Res., 46 (16), p. 8483-8499., 2018.

Weinsanto, I; Laux-Biehlmann, A; Mouheiche, J; Maduna, T; Delalande, F; Chavant, V; Gabel, F; Darbon, P; Charlet, A; Poisbeau, P; Lamshöft, M; Dorsselaer, Van A; Cianferani, S; Parat, MO.; Goumon, Y

Stable isotope-labelled morphine to study in vivo central and peripheral morphine glucuronidation and brain transport in tolerant mice. Article de journal

Br J Pharmacol., 175 (19), p. 3844-3856., 2018.

Weinsanto, I; Mouheiche, J; Laux-Biehlmann, A; Delalande, F; Marquette, A; Chavant, V; Gabel, F; Cianferani, S; Charlet, A; Parat, MO.; Goumon, Y

Morphine Binds Creatine Kinase B and Inhibits Its Activity. Article de journal

Front Cell Neurosci., p. 12:464, 2018.

Salvi, Daniel; Bournais, Sylvain; Moyet, Lucas; Bouchnak, Imen; Kuntz, Marcel; Bruley, Christophe; Rolland, Norbert

AT_CHLORO: The First Step When Looking for Information About Subplastidial Localization of Proteins Article de journal

Methods in Molecular Biology (Clifton, N.J.), 1829 , p. 395–406, 2018, ISSN: 1940-6029.

Résumé | Liens

Govin, Jérôme; Barral, Sophie; Morozumi, Yuichi; Hoghoughi, Naghmeh; Buchou, Thierry; Rousseaux, Sophie; Khochbin, Saadi

Characterization of Post-Meiotic Male Germ Cell Genome Organizational States Article de journal

Methods in Molecular Biology (Clifton, N.J.), 1832 , p. 293–307, 2018, ISSN: 1940-6029.

Résumé | Liens

D'Atri, V; Causon, T; Hernandez-Alba, O; Mutabazi, A; Veuthey, JL.; Cianférani, S; Guillarme, D

Adding a new separation dimension to MS and LC-MS: What is the utility of ion mobility spectrometry? Article de journal

J Sep Sci., 41 (1), p. 20-67, 2018.

Liens

2017

Bouguenina, H; Salaun, D; Mangon, A; Muller, L; Baudelet, E; Camoin, L; Tachibana, T; Cianférani, S; Audebert, S; Verdier-Pinard, P; Badache, A

EB1-binding-myomegalin protein complex promotes centrosomal microtubules functions Article de journal

Proc Natl Acad Sci U S A., 114 (50), p. E10687-E10696, 2017.

Liens

Erales, Jenny; Marchand, Virginie; Panthu, Baptiste; Gillot, Sandra; Belin, Stéphane; Ghayad, Sandra E; Garcia, Maxime; Laforêts, Florian; Marcel, Virginie; Baudin-Baillieu, Agnès; Bertin, Pierre; Couté, Yohann; Adrait, Annie; Meyer, Mélanie; Therizols, Gabriel; Yusupov, Marat; Namy, Olivier; Ohlmann, Théophile; Motorin, Yuri; Catez, Frédéric; Diaz, Jean-Jacques

Evidence for rRNA 2'-O-methylation plasticity: Control of intrinsic translational capabilities of human ribosomes Article de journal

Proceedings of the National Academy of Sciences of the United States of America, 114 (49), p. 12934–12939, 2017, ISSN: 1091-6490.

Résumé | Liens

Arvin-Berod, Marie; Desroches-Castan, Agnès; Bonte, Simon; Brugière, Sabine; Couté, Yohann; Guyon, Laurent; Feige, Jean-Jacques; Baussanne, Isabelle; Demeunynck, Martine

Indolizine-Based Scaffolds as Efficient and Versatile Tools: Application to the Synthesis of Biotin-Tagged Antiangiogenic Drugs Article de journal

ACS Omega, 2 (12), p. 9221–9230, 2017, ISSN: 2470-1343.

Résumé | Liens

Cheng, Daian; Deobagkar-Lele, Mukta; Zvezdova, Ekaterina; Choi, Seeyoung; Uehara, Shoji; Baup, Delphine; Bennett, Sophia C; Bull, Katherine R; Crockford, Tanya L; Ferry, Helen; Warzecha, Claude; è, Marl; de Peredo, Anne Gonzalez; Lesourne, Renaud; Anzilotti, Consuelo; Love, Paul E; Cornall, Richard J

Themis2 lowers the threshold for B cell activation during positive selection Article de journal

Nature immunology, 18 (2), p. 205–213, 2017.

Liens

Roitel, Olivier; Bonnard, Lionel; Stella, Alexandre; Schiltz, Odile; Maurice, Delphine; ë, Ga; Jacquenet, Sandrine; Favrot, Claude; Bihain, Bernard E; Couturier, Nicolas

Detection of IgE-reactive proteins in hydrolysed dog foods Article de journal

Veterinary dermatology, 28 (6), p. 589–e143, 2017.

Liens

Carapito, C; Duek, P; Macron, C; Seffals, M; Rondel, K; Delalande, F; Lindskog, C; Freour, T; Vandenbrouck, Y; Lane, L; Pineau, C

Validating missing proteins in human sperm cells by targeted mass spectrometry- and antibody-based methods Article de journal

J Proteome Res, 16 (12), p. 4340-4351, 2017.

Liens

Grillon, A; Westermann, B; Cantero, P; Jaulhac, B; Voordouw, M J; Kapps, D; Collin, E; Barthel, C; Ehret-Sabatier, L; Boulanger, N

Identification of Borrelia protein candidates in mouse skin for potential diagnosis of disseminated Lyme borreliosis Article de journal

Sci Rep., 7 (1), p. 16719, 2017.

Liens

Charbonnel, C; Niazi, Khan A; Elvira-Matelor, E; Nowak, E; Zytnicki, M; de Bures, A; Jobet, E; Opsomer, A; Shamandi, N; Nowotny, M; Carapito, C; Reichheld, J P; Vaucheret, H; Saez-Vasquez, J

The siRNA suppressor RTL1 is redox-regulated through glutathionylation of a conserved cysteine in the doublestranded-RNA-binding domain Article de journal

Nucleic Acids Res., 45 (20), p. 11891-11907, 2017.

Liens

Aillaud, Chrystelle; Bosc, Christophe; Peris, Leticia; Bosson, Anouk; Heemeryck, Pierre; Dijk, Juliette Van; Friec, Julien Le; Boulan, Benoit; Vossier, Frédérique; Sanman, Laura E; Syed, Salahuddin; Amara, Neri; Couté, Yohann; Lafanechère, Laurence; Denarier, Eric; Delphin, Christian; Pelletier, Laurent; Humbert, Sandrine; Bogyo, Matthew; Andrieux, Annie; Rogowski, Krzysztof; Moutin, Marie-Jo

Vasohibins/SVBP are tubulin carboxypeptidases (TCP) that regulate neuron differentiation Article de journal

Science (New York, N.Y.), 2017, ISSN: 1095-9203.

Résumé | Liens

Yamchi, Ahad; Ben, Cécile; Rossignol, Michel; Zareie, Sayed Reza; Mirlohi, Aghafakhr; Sayed-Tabatabaei, Badraldin Ebrahim; Pichereaux, Carole; Sarrafi, Ahmad; Rickauer, Martina; Gentzbittel, Laurent

Proteomics analysis of Medicago truncatula response to infection by the phytopathogenic bacterium Ralstonia solanacearum points to jasmonate and salicylate defence pathways. Article de journal

Cellular microbiology, p. e12796, 2017.

Liens

Montacié, C; Durut, N; Opsomer, A; Palm, D; Comella, P; Picart, C; Carpentier, M C; Pontvianne, F; Carapito, C; Schleiff, E; Saez-Vasquez, J

Nucleolar proteome analysis and proteasomal activity assays reveal a link between nucleolus and 26S proteasome in A. thaliana Article de journal

Front Plant Sci., 8 , p. 1815., 2017.

Liens

Terral, G; CHAMPION, T; Debaene, F; Colas, O; Bourguet, M; WAGNER-ROUSSET, E; Corvaia, N; Beck, A; Cianferani, S

Epitope characterization of anti-JAM-A antibodies using orthogonal mass spectrometry and surface plasmon resonance approaches Article de journal

MAbs., 9 (8), p. 1317-1326, 2017.

Liens

Radu, L; Schoenwetter, E; Braun, C; Marcoux, J; Koelmel, W; Schmitt, DR.; Kuper, J; Cianférani, S; Egly, JM.; Poterszman, A; Kisker, C

The intricate network between the p34 and p44 subunits is central to the activity of the transcription/DNA repair factor TFIIH Article de journal

Nucleic Acids Res., 45 (18), p. 10872-10883, 2017.

Liens

Chiaradia, Laura; Lefebvre, Cyril; Parra, Julien; Marcoux, Julien; Burlet-Schiltz, Odile; Etienne, Gilles; Tropis, Maryelle; Daffé, Mamadou

Dissecting the mycobacterial cell envelope and defining the composition of the native mycomembrane Article de journal

Scientific Reports, 7 (1), p. 12807, 2017.

Liens

Guéguéniat, J; Dupin, AF.; Stojko, J; Beaurepaire, L; Cianférani, S; Mackereth, CD.; Minvielle-Sébastia, L; Fribourg, S

Distinct roles of Pcf11 zinc-binding domains in pre-mRNA 3'-end processing Article de journal

Nucleic Acids Res., 45 (17), p. 10115-10131, 2017.

Liens

Sorigué, Damien; Légeret, Bertrand; Cuiné, Stéphan; Blangy, Stéphanie; Moulin, Solène; Billon, Emmanuelle; Richaud, Pierre; Brugière, Sabine; Couté, Yohann; Nurizzo, Didier; Müller, Pavel; Brettel, Klaus; Pignol, David; Arnoux, Pascal; Li-Beisson, Yonghua; Peltier, Gilles; Beisson, Fred

An algal photoenzyme converts fatty acids to hydrocarbons Article de journal

Science (New York, N.Y.), 357 (6354), p. 903-907, 2017.

Liens

Baxter, P N W; Karmazin, L; DeCian, A; Varnek, A; Gisselbrecht, J -P; Strub, J -M; Cianférani, S

A Direct One-Pot Synthesis of Asymmetric Dehydrobenzopyrido-[12]annulenes and Their Physicochemical Properties Article de journal

Eur. J. Org. Chem., 2017 (31), p. 4625–4632, 2017.

Liens

Maes, Pauline; Donadio-Andréi, Sandrine; Louwagie, Mathilde; Couté, Yohann; Picard, Guillaume; Lacoste, Claire; Bruley, Christophe; Garin, Jérôme; Ichai, Philippe; Faivre, Jamila; Jaquinod, Michel; Brun, Virginie

Introducing plasma/serum glycodepletion for the targeted proteomics analysis of cytolysis biomarkers Article de journal

Talanta, 170 , p. 473-480, 2017.

Liens

Alonso, Henar; Parra, Julien; Malaga, Wladimir; Payros, Delphine; Liu, Chia-Fang; Berrone, Céline; Robert, Camille; Meunier, Etienne; Burlet-Schiltz, Odile; è, Michel Rivi; Guilhot, Christophe

Protein O-mannosylation deficiency increases LprG-associated lipoarabinomannan release by Mycobacterium tuberculosis and enhances the TLR2-associated inflammatory response Article de journal

Scientific Reports, 7 (1), p. 7913, 2017.

Liens

F, Duguet; M, Locard-Paulet; M, Marcellin; K, Chaoui; I, Bernard; O, Andreoletti; R, Lesourne; O, Burlet-Schiltz; de A, Gonzalez Peredo; A, Saoudi

Proteomic analysis of regulatory T cells reveals the importance of Themis1 in the control of their suppressive function Article de journal

Mol Cell Proteomics, 16 , p. 1416-1432, 2017.

Liens

Dalzon, B; Aude-Garcia, C; Collin-Faure, V; Diemer, H; Béal, D; Dussert, F; Fenel, D; Schoehn, G; Cianférani, S; Carrière, M; Rabilloud, T

Differential proteomics highlights macrophage-specific responses to amorphous silica nanoparticles Article de journal

Nanoscale, 9 (27), p. 9641-9658, 2017.

Liens

Bartoli, J; My, L; Belmudes, Lucid; Couté, Yohann; Viala, J P; Bouveret, E

The Long Hunt for pssR-Looking for a Phospholipid Synthesis Transcriptional Regulator, Finding the Ribosome Article de journal

Journal of Bacteriology, 199 (14), 2017.

Liens

Miller, Marion; Chen, Aichun; Gobert, Vanessa; Augé, Benoit; Beau, Mathilde; Burlet-Schiltz, Odile; Haenlin, Marc; Waltzer, Lucas

Control of RUNX-induced repression of Notch signaling by MLF and its partner DnaJ-1 during Drosophila hematopoiesis Article de journal

PLoS Genetics, 13 (7), p. e1006932, 2017.

Liens

C, Dozier; L, Mazzolini; C, Cénac; C, Froment; O, Burlet-Schiltz; A, Besson; S, Manenti

CyclinD-CDK4/6 complexes phosphorylate CDC25A and regulate its stability Article de journal

Oncogene, 36 (26), p. 3781-3788, 2017.

Liens

Mohideen-Abdul, K; Tazibt, K; Bourguet, M; Hazemann, I; Lebars, I; Takacs, M; Cianférani, S; Klaholz, B P; Moras, D; Billas, I M L

Importance of the Sequence-Directed DNA Shape for Specific Binding Site Recognition by the Estrogen-Related Receptor Article de journal

Front. Endocrinol., 8 , p. 140, 2017.

Liens

Gloaguen, Pauline; Bournais, Sylvain; Alban, Claude; Ravanel, Stéphane; Seigneurin-Berny, Daphné; Matringe, Michel; Tardif, Marianne; Kuntz, Marcel; Ferro, Myriam; Bruley, Christophe; Rolland, Norbert; Vandenbrouck, Yves; Curien, Gilles

ChloroKB: A Web Application for the Integration of Knowledge Related to Chloroplast Metabolic Network Article de journal

Plant Physiology, 174 (2), p. 922-934, 2017.

Liens

Vizcaíno, Juan Antonio; Walzer, Mathias; Jiménez, Rafael C; Bittremieux, Wout; Bouyssié, David; Carapito, Christine; Corrales, Fernando; Ferro, Myriam; Heck, Albert J R; Horvatovich, Peter; Hubalek, Martin; Lane, Lydie; Laukens, Kris; Levander, Fredrik; Lisacek, Frederique; Novak, Petr; Palmblad, Magnus; Piovesan, Damiano; Pühler, Alfred; Schwämmle, Veit; Valkenborg, Dirk; van Rijswijk, Merlijn; Vondrasek, Jiri; Eisenacher, Martin; Martens, Lennart; Kohlbacher, Oliver

A community proposal to integrate proteomics activities in ELIXIR Article de journal

F1000Research, 6 , p. 875, 2017.

Liens

Botzanowski, T; Erb, S; Hernandez-Alba, O; Ehkirch, A; Colas, O; Wagner-Rousset, E; Rabuka, D; Beck, A; Drake, PM.; Cianférani, S

Insights from native mass spectrometry approaches for top- and middle- level characterization of site-specific antibody-drug conjugates Article de journal

MAbs, 9 (5), p. 801-811, 2017.

Liens

Wagner-Rousset, E; Fekete, S; Morel-Chevillet, L; Colas, O; Corvaïa, N; Cianférani, S; Guillarme, D; Beck, A

Development of a fast workflow to screen the charge variants of therapeutic antibodies Article de journal

J Chromatogr A, 1498 , p. 147-154, 2017.

Liens

Dovgan, I; Ursuegui, S; Erb, S; Michel, C; Kolodych, S; Cianférani, S; Wagner, A

Acyl Fluorides: Fast, Efficient, and Versatile Lysine-Based Protein Conjugation via Plug-and-Play Strategy Article de journal

Bioconjug Chem., 28 (5), p. 1452-1457, 2017.

Liens

Argemi, X; Prévost, G; Riegel, P; Keller, D; Meyer, N; Baldeyrou, M; Douiri, N; Lefebvre, N; Meghit, K; Ronde Oustau, C; Christmann, D; Cianférani, S; Strub, JM. ; Hansmann, Y

VISLISI trial, a prospective clinical study allowing identification of a new metalloprotease and putative virulence factor from Staphylococcus lugdunensis Article de journal

Clin Microbiol Infect., 23 (5), p. 334.e1–334.e8, 2017.

Liens

Mietton, Flore; Ferri, Elena; Champleboux, Morgane; Zala, Ninon; Maubon, Danièle; Zhou, Yingsheng; Harbut, Mike; Spittler, Didier; Garnaud, Cécile; Courçon, Marie; Chauvel, Murielle; d'Enfert, Christophe ; Kashemirov, Boris A; Hull, Mitchell; Cornet, Muriel; McKenna, Charles E; Govin, Jérôme; Petosa, Carlo

Selective BET bromodomain inhibition as an antifungal therapeutic strategy Article de journal

Nature Communications, 8 , p. 15482, 2017.

Liens

Willems, Sander; Bouyssié, David; David, Matthieu; Locard-Paulet, Marie; Mechtler, Karl; Schwämmle, Veit; Uszkoreit, Julian; Vaudel, Marc; Dorfer, Viktoria

Proceedings of the EuBIC Winter School 2017. Article de journal

Journal of proteomics, 161 , p. 78–80, 2017.

Liens

C, Carel; J, Marcoux; V, Réat; J, Parra; G, Latgé; F, Laval; P, Demange; O, Burlet-Schiltz; A, Milon; M, Daffé; MG, Tropis; MA, Renault

Identification of specific posttranslational O-mycoloylations mediating protein targeting to the mycomembrane Article de journal

Proc Natl Acad Sci U S A, 114 (16), p. 4231-4236, 2017.

Liens

Ehrmann, FR.; Stojko, J; Metz, A; Debaene, F; Barandun, LJ.; Heine, A; Diederich, F; Cianférani, S; Reuter, K; Klebe, G

Soaking suggests Article de journal

PLoS One, 12 (4), p. e0175723, 2017.

Liens

Fabre, Elisabeth; Jeudy, Sandra; Santini, Sébastien; Legendre, Matthieu; Trauchessec, Mathieu; Couté, Yohann; Claverie, Jean-Michel; Abergel, Chantal

Noumeavirus replication relies on a transient remote control of the host nucleus Article de journal

Nature Communications, 8 , p. 15087, 2017.

Liens

Duriez, Elodie; Masselon, Christophe D; Mesmin, Cédric; Court, Magali; Demeure, Kevin; Allory, Yves; Malats, Núria; Matondo, Mariette; Radvanyi, François; Garin, Jérôme; Domon, Bruno

Large-Scale SRM Screen of Urothelial Bladder Cancer Candidate Biomarkers in Urine Article de journal

Journal of Proteome Research, 16 (4), p. 1617–1631, 2017.

Liens

Matondo, Mariette; è, Marl; Chaoui, Karima; Bousquet-Dubouch, Marie Pierre; Gonzalez-de-Peredo, Anne; Monsarrat, Bernard; Burlet-Schiltz, Odile

Determination of differentially regulated proteins upon proteasome inhibition in AML cell lines by the combination of large-scale and targeted quantitative proteomics Article de journal

Proteomics, 17 (7), p. 1600089, 2017.

Liens

Carel, Clément; Marcoux, Julien; Réat, Valérie; Parra, Julien; Latgé, Guillaume; ç, Fran; Demange, Pascal; Burlet-Schiltz, Odile; Milon, Alain; Daffé, Mamadou; Tropis, Maryelle G; Renault, Marie A M

Identification of specific posttranslational O -mycoloylations mediating protein targeting to the mycomembrane Article de journal

Proceedings of the National Academy of Sciences, 114 (16), p. 4231–4236, 2017.

Liens

Rosnoblet, Claire; è, Hervé B; Blanchard, Cécile; Pichereaux, Carole; Besson-Bard, Angélique; Aimé, Sébastien; Wendehenne, David

Functional characterization of the chaperon-like protein Cdc48 in cryptogein-induced immune response in tobacco. Article de journal

Plant, cell & environment, 40 (4), p. 491–508, 2017.

Liens

Barral, Sophie; Morozumi, Yuichi; Tanaka, Hiroki; Montellier, Emilie; Govin, Jérôme; de Dieuleveult, Maud ; Charbonnier, Guillaume; Couté, Yohann; Puthier, Denis; Buchou, Thierry; Boussouar, Fayçal; Urahama, Takashi; Fenaille, François; Curtet, Sandrine; Héry, Patrick; Fernandez-Nunez, Nicolas; Shiota, Hitoshi; Gérard, Matthieu; Rousseaux, Sophie; Kurumizaka, Hitoshi; Khochbin, Saadi

Histone Variant Ħ2A.L.2 Guides Transition Protein-Dependent Protamine Assembly in Male Germ Cells Article de journal

Molecular Cell, 66 (1), p. 89-101.e8, 2017.

Liens

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