ProFi Achievements

Publications

533 Entrées « 3 de 6 »

2017

S, Deota; T, Chattopadhyay; D, Ramachandran; E, Armstrong; B, Camacho; B, Maniyadath; A, Fulzele; A, Gonzalez-de-Peredo; JM, Denu; U, Kolthur-Seetharam

Identification of a Tissue-Restricted Isoform of SIRT1 Defines a Regulatory Domain that Encodes Specificity Article de journal

Cell Rep, 18 , p. 3069-3077, 2017.

Liens

Westermann, B; Jacome, AS. Vaca; Rompais, M; Carapito, C; Schaeffer-Reiss, C

Doublet N-Terminal Oriented Proteomics for N-Terminomics and Proteolytic Processing Identification Article de journal

Methods Mol Biol., 1574 , p. 77-90, 2017.

Liens

Parra, Julien; Marcoux, Julien; Poncin, Isabelle; Canaan, Stéphane; Herrmann, Jean Louis; ô, Jér; Burlet-Schiltz, Odile; è, Michel Rivi

Scrutiny of Mycobacterium tuberculosis 19 kDa antigen proteoforms provides new insights in the lipoglycoprotein biogenesis paradigm Article de journal

Scientific Reports, 7 , p. 43682, 2017.

Liens

Gilquin, Benoît; Louwagie, Mathilde; Jaquinod, Michel; Cez, Alexandre; Picard, Guillaume; Kholy, Leila El; Surin, Brigitte; Garin, Jérôme; Ferro, Myriam; Kofman, Thomas; Barau, Caroline; Plaisier, Emmanuelle; Ronco, Pierre; Brun, Virginie

Multiplex and accurate quantification of acute kidney injury biomarker candidates in urine using Protein Standard Absolute Quantification (PSAQ) and targeted proteomics Article de journal

Talanta, 164 , p. 77-84, 2017.

Liens

Bourgeois, G; Marcoux, J; Saliou, J M; Cianférani, S; Graille, M

Activation mode of the eukaryotic m2G10 tRNA methyltransferase Trm11 by its partner protein Trm112 Article de journal

Nucleic Acids Res., 45 (4), p. 1971-1982, 2017.

Liens

Lanshoeft, C; Cianférani, S; Heudi, O

Generic Hybrid Ligand Binding Assay Liquid Chromatography High-Resolution Mass Spectrometry-Based Workflow for Multiplexed Human Immunoglobulin G1 Quantification at the Intact Protein Level: Application to Preclinical Pharmacokinetic Studies Article de journal

Anal Chem., 89 (4), p. 2628-2635., 2017.

Liens

Bissé, E; Schaeffer-Reiss, C; Van Dorsselaer, A; Alayi, TD.; Epting, T; Winkler, K; Cardenas, AS. Benitez; Soman, J; Birukou, I; Samuel, PP.; Olson, JS.

Hemoglobin Kirklareli (α H58L), a New Variant Associated with Iron Deficiency and Increased CO Binding Article de journal

J Biol Chem., 292 (6), p. 2542-2555, 2017.

Liens

Hsu, Chiung Yueh; Gasc, Géraldine; Raymond, Anne Aurélie; Burlet-Schiltz, Odile; Takahara, Hidenari; Serre, Guy; Méchin, Marie Claire; Simon, Michel

Deimination of Human Hornerin Enhances its Processing by Calpain-1 and its Cross-Linking by Transglutaminases Article de journal

Journal of Investigative Dermatology, 137 (2), p. 422–429, 2017.

Liens

D, Cheng; M, Deobagkar-Lele; E, Zvezdova; S, Choi; S, Uehara; D, Baup; SC, Bennett; KR, Bull; TL, Crockford; H, Ferry; C, Warzecha; M, Marcellin; de A, Gonzalez Peredo; R, Lesourne; C, Anzilotti; PE, Love; RJ, Cornall

Themis2 lowers the threshold for B cell activation during positive sele Article de journal

Nat Immunol, 18 (2), p. 205-213, 2017.

Liens

Kadek, A; Kavan, D; Marcoux, J; Stojko, J; Felice, AK.; Cianférani, S; Ludwig, R; Halada, P; Man, P

Interdomain electron transfer in cellobiose dehydrogenase is governed by surface electrostatics Article de journal

Biochim Biophys Acta., 1861 (2), p. 157-167, 2017.

Liens

Do, Le-Duy; Chanson, Eve; Desestret, Virginie; Joubert, Bastien; Ducray, François; Brugière, Sabine; Couté, Yohann; Formaglio, Maité; Rogemond, Veronique; Thomas-Antérion, Catherine; Borrega, Laura; Laurens, Brice; Tison, Francois; Curot, Jonathan; De Brouker, Thomas ; Lebrun-Frenay, Christine; Delattre, Jean-Yves; Antoine, Jean-Christophe; Honnorat, Jerome

Characteristics in limbic encephalitis with anti-adenylate kinase 5 autoantibodies Article de journal

Neurology, 88 (6), p. 514-524, 2017.

Liens

van Lis, Robert; Popek, Marion; Couté, Yohann; Kosta, Artemis; Drapier, Dominique; Nitschke, Wolfgang; Atteia, Ariane

Concerted Up-regulation of Aldehyde/Alcohol Dehydrogenase (ADHE) and Starch in Chlamydomonas reinhardtii Increases Survival under Dark Anoxia Article de journal

The Journal of Biological Chemistry, 292 (6), p. 2395-2410, 2017.

Liens

Dezest, Marlène; Chavatte, Laurent; Bourdens, Marion; Quinton, Damien; Camus, Mylène; Garrigues, Luc; Descargues, Pascal; Arbault, Stéphane; Burlet-Schiltz, Odile; Casteilla, Louis; Clément, Franck; Planat, Valérie; Bulteau, Anne Laure

Mechanistic insights into the impact of Cold Atmospheric Pressure Plasma on human epithelial cell lines Article de journal

Scientific Reports, 7 , p. 41163, 2017.

Liens

Roux, A; Gillet, R; Huclier-Markai, S; Ehret-Sabatier, L; Charbonnière, L; Nonat, A

Bifunctional bispidine derivatives for copper-64 labelling and Positron Emission Tomography Article de journal

Org. Biomol. Chem., 15 , p. 1475-1483, 2017.

Liens

Carapito, C; Kuhn, L; Karim, L; Rompais, M; Rabilloud, T; Schwenzer, H; Sissler, M

Two proteomic methodologies for defining N-termini of mature human mitochondrial aminoacyl-tRNA synthetases Article de journal

Methods, 113 , p. 111-119, 2017.

Liens

Cura, V; Maréchal, N; Troffer-Charlier, N; Strub, JM.; van Haren, MJ.; Martin, NI.; Cianférani, S; Bonnefond, L; Cavarelli, J

Structural studies of protein arginine methyltransferase 2 reveal its interactions with potential substrates and inhibitors Article de journal

FEBS J., 284 (1), p. 77-96, 2017.

Liens

Licona, C; Spaety, ME.; Capuozzo, A; Ali, M; Santamaria, R; Armant, O; Delalande, F; Van Dorsselaer, A; Cianférani, S; Spencer, J; Pfeffer, M; Mellitzer, G; Gaiddon, Ch.

A ruthenium anticancer compound interacts with histones and impacts differently on epigenetic and death pathways compared to cisplatin Article de journal

Oncotarget, 8 (2), p. 2568-2584, 2017.

Liens

Alfieri, Annalisa; Sorokina, Oksana; Adrait, Annie; Angelini, Costanza; Russo, Isabella; Morellato, Alessandro; Matteoli, Michela; Menna, Elisabetta; Erba, Elisabetta Boeri; McLean, Colin; Armstrong, Douglas J; Ala, Ugo; Buxbaum, Joseph D; Brusco, Alfredo; Couté, Yohann; Rubeis, Silvia De; Turco, Emilia; Defilippi, Paola

Synaptic Interactome Mining Reveals p140Cap as a New Hub for PSD Proteins Involved in Psychiatric and Neurological Disorders Article de journal

Frontiers in Molecular Neuroscience, 10 , p. 212, 2017.

Liens

Carapito, Christine; Duek, Paula; Macron, Charlotte; Seffals, Marine; Rondel, Karine; Delalande, François; Lindskog, Cecilia; Fréour, Thomas; Vandenbrouck, Yves; Lane, Lydie; Pineau, Charles

Validating Missing Proteins in Human Sperm Cells by Targeted Mass-Spectrometry- and Antibody-based Methods Article de journal

Journal of Proteome Research, 2017, ISSN: 1535-3907.

Résumé | Liens

Beaumel, Sylvain; Picciocchi, Antoine; Debeurme, Franck; Vivès, Corinne; Hesse, Anne-Marie; Ferro, Myriam; Grunwald, Didier; Stieglitz, Heather; Thepchatri, Pahk; Smith, Susan M E; Fieschi, Franck; Stasia, Marie José

Down-regulation of NOX2 activity in phagocytes mediated by ATM-kinase dependent phosphorylation Article de journal

Free Radical Biology & Medicine, 113 , p. 1–15, 2017, ISSN: 1873-4596.

Résumé | Liens

Sonntag, Eric; Milbradt, Jens; Svrlanska, Adriana; Strojan, Hanife; Häge, Sigrun; Kraut, Alexandra; Hesse, Anne-Marie; Amin, Bushra; Sonnewald, Uwe; Couté, Yohann; Marschall, Manfred

Protein kinases responsible for the phosphorylation of the nuclear egress core complex of human cytomegalovirus Article de journal

The Journal of General Virology, 98 (10), p. 2569–2581, 2017, ISSN: 1465-2099.

Résumé | Liens

Sindikubwabo, Fabien; Ding, Shuai; Hussain, Tahir; Ortet, Philippe; Barakat, Mohamed; Baumgarten, Sebastian; Cannella, Dominique; Palencia, Andrés; Bougdour, Alexandre; Belmudes, Lucid; Couté, Yohann; Tardieux, Isabelle; Botté, Cyrille Y; Scherf, Artur; Hakimi, Mohamed-Ali

Modifications at K31 on the lateral surface of histone Ħ4 contribute to genome structure and expression in apicomplexan parasites Article de journal

eLife, 6 , 2017, ISSN: 2050-084X.

Résumé | Liens

Stojko, J; Dupin, A; Chaignepain, S; Beaurepaire, L; Vallet-Courbin, A; Dorsselaer, Van A; Schmitter, J -M; Minvielle-Sébastia, L; Fribourg, S; Cianférani, S

Structural characterization of the yeast CF IA complex through a combination of mass spectrometry approaches Article de journal

International Journal of Mass Spectrometry, 420 , p. 57–66, 2017.

Tascher, G; Brioche, T; Maes, P; Chopard, A; O’Gorman, D; Gauquelin-Koch, G; Blanc, S; Bertile, F

Proteome-wide Adaptations of Mouse Skeletal Muscles during a Full Month in Space Article de journal

J. Proteome Res., 16 , p. 2623−2638, 2017.

Wieczorek, Samuel ; Combes, Florence ; Lazar, Cosmin ; Giai Gianetto, Quentin ; Gatto, Laurent ; Dorffer, Alexia ; Hesse, Anne-Marie ; Couté, Yohann ; Ferro, Myriam ; Bruley, Christophe ; Burger, Thomas

DAPAR & ProStaR: software to perform statistical analyses in quantitative discovery proteomics Article de journal

Bioinformatics (Oxford, England), 33 , p. 135-136, 2017.

Liens

Bertile, F; Fouillen, L; Wasselin, T; Maes, P; Maho, Le Y; Dorsselaer, Van A; Raclot, T

The Safety Limits Of An Extended Fast: Lessons from a Non-Model Organism. Article de journal

Sci Rep., in press, doi: 10.1038/srep39008. , 2017.

Burel, A; Carapito, C; Lutz, J F; Charles, L

MS-DECODER: Milliseconds Sequencing of Coded Polymers. Article de journal

Macromolecules, 50 (20), p. 8290-8296, 2017.

Liens

Gissot, M; Hovasse, A; Chaloin, L; Schaeffer-Reiss, C; Dorsselaer, Van A; Tomavo, S

An evolutionary conserved zinc finger protein is involved in Toxoplasma gondii mRNA nuclear export. Article de journal

Cell Microbiol., 19 (2), p. doi: 10.1111/cmi.12644., 2017.

Lemaître-Guillier, C; Hovasse, A; Schaeffer-Reiss, C; Recorbet, G; Poinssot, B; Trouvelot, S; Daire, X; Adrian, M; Héloir, M -C

Proteomics towards the understanding of elicitor induced resistance of grapevine against downy mildew Article de journal

Journal of Proteomics, 156 , p. 113–125, 2017.

Boruc, Joanna; Weimer, Annika K; Stoppin-Mellet, Virginie; Mylle, Evelien; Kosetsu, Ken; Cedeño, Cesyen; Jaquinod, Michel; Njo, Maria; De Milde, Liesbeth ; Tompa, Peter; Gonzalez, Nathalie; Inzé, Dirk; Beeckman, Tom; Vantard, Marylin; Van Damme, Daniël

Phosphorylation of MAP65-1 by Arabidopsis Aurora Kinases Is Required for Efficient Cell Cycle Progression Article de journal

Plant Physiology, 173 (1), p. 582–599, 2017.

Liens

García-Oliver, Encar; Ramus, Claire; Perot, Jonathan; Arlotto, Marie; Champleboux, Morgane; Mietton, Flore; Battail, Christophe; Boland, Anne; Deleuze, Jean-François; Ferro, Myriam; Couté, Yohann; Govin, Jérôme

Bdf1 Bromodomains Are Essential for Meiosis and the Expression of Meiotic-Specific Genes Article de journal

PLoS genetics, 13 (1), p. e1006541, 2017.

Liens

Kennani, Sara El; Adrait, Annie; Shaytan, Alexey K; Khochbin, Saadi; Bruley, Christophe; Panchenko, Anna R; Landsman, David; Pflieger, Delphine; Govin, Jérôme

MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones Article de journal

Epigenetics & Chromatin, 10 , p. 2, 2017.

Liens

2016

Souri, N; Tian, P; Lecointre, A; Lemaire, Z; Chafaa, S; Strub, JM.; Cianférani, S; Elhabiri, M; Platas-Iglesias, C; Charbonnière, LJ.

Step by Step Assembly of Polynuclear Lanthanide Complexes with a Phosphonated Bipyridine Ligand Article de journal

Inorg Chem., 55 (24), p. 12962-12974, 2016.

Liens

Lee, Hangyeore; Mun, Dong-Gi; So, Jeong Eun; Bae, Jingi; Kim, Hokeun; Masselon, Christophe; Lee, Sang-Won

Efficient Exploitation of Separation Space in Two-Dimensional Liquid Chromatography System for Comprehensive and Efficient Proteomic Analyses Article de journal

Analytical Chemistry, 88 (23), p. 11734-11741, 2016.

Liens

Vandenbrouck, Yves; Lane, Lydie; Carapito, Christine; Duek, Paula; Rondel, Karine; Bruley, Christophe; Macron, Charlotte; Gonzalez De Peredo, Anne ; Couté, Yohann; Chaoui, Karima; Com, Emmanuelle; Gateau, Alain; Hesse, Anne Marie; Marcellin, Marlène; Méar, Loren; Mouton-Barbosa, Emmanuelle; Robin, Thibault; Burlet-Schiltz, Odile; Cianférani, Sarah; Ferro, Myriam; Fréour, Thomas; Lindskog, Cecilia; Garin, Jérôme; Pineau, Charles

Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update Article de journal

Journal of Proteome Research, 15 (11), p. 3998-4019, 2016.

Liens

Socoro-Yuste, Nuria; Dagher, Marie-Claire; Gonzalez De Peredo, Anne ; Mondet, Julie; Zaccaria, Affif; Roux Dalvai, Florence ; Plo, Isabelle; Cahn, Jean Yves; Mossuz, Pascal

Ph(-) myeloproliferative neoplasm red blood cells display deregulation of IQGAP1-Rho GTPase signaling depending on CALR/JAK2 status Article de journal

Biochimica et biophysica acta, 1863 (11), p. 2758-2765, 2016.

Liens

Cerveau, Delphine; Kraut, Alexandra; Stotz, Henrik U; Mueller, Martin J; Couté, Yohann; Rey, Pascal

Characterization of the Arabidopsis thaliana 2-Cys peroxiredoxin interactome Article de journal

Plant Science: An International Journal of Experimental Plant Biology, 252 , p. 30–41, 2016.

Liens

Wagner, Raik; von Sydow, Lotta ; Aigner, Harald; Netotea, Sergiu; Brugière, Sabine; Sjögren, Lars; Ferro, Myriam; Clarke, Adrian; Funk, Christiane

Deletion of FtsH11 protease has impact on chloroplast structure and function in Arabidopsis thaliana when grown under continuous light Article de journal

Plant, Cell & Environment, 39 (11), p. 2530–2544, 2016.

Liens

Deutsch, Eric W; Overall, Christopher M; Eyk, Jennifer Van E; Baker, Mark S; Paik, Young-Ki; Weintraub, Susan T; Lane, Lydie; Martens, Lennart; Vandenbrouck, Yves; Kusebauch, Ulrike; Hancock, William S; Hermjakob, Henning; Aebersold, Ruedi; Moritz, Robert L; Omenn, Gilbert S

Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1 Article de journal

Journal of Proteome Research, 15 (11), p. 3961–3970, 2016.

Liens

Duek, Paula; Bairoch, Amos; Gateau, Alain; Vandenbrouck, Yves; Lane, Lydie

Missing Protein Landscape of Human Chromosomes 2 and 14: Progress and Current Status Article de journal

Journal of Proteome Research, 15 (11), p. 3971-3978, 2016.

Liens

Gilquin, Benoit; Jaquinod, Michel; Louwagie, Mathilde; Kieffer-Jaquinod, Sylvie; Kraut, Alexandra; Ferro, Myriam; Becher, François; Brun, Virginie

A proteomics assay to detect eight CBRN-relevant toxins in food Article de journal

Proteomics, 2016.

Liens

Muller, L; Fornecker, L; Van Dorsselaer, A; Cianférani, S; Carapito, C

Benchmarking sample preparation/digestion protocols reveals tube-gel being a fast and repeatable method for quantitative proteomics Article de journal

Proteomics, 16 (23), p. 2953-2961, 2016.

Liens

Gautier, Violette; Cayrol, Corinne; Farache, Dorian; Roga, Stéphane; Monsarrat, Bernard; Burlet-Schiltz, Odile; Gonzalez De Peredo, Anne ; Girard, Jean Philippe

Extracellular IL-33 cytokine, but not endogenous nuclear IL-33, regulates protein expression in endothelial cells Article de journal

Scientific Reports, 6 (1), p. 34255, 2016.

Liens

Le, Nguyen Hung; Molle, Virginie; Eynard, Nathalie; Miras, Mathieu; Stella, Alexandre; Bardou, Fabienne; è, Ségol; Guillet, Valérie; ë, Gwena; Bellinzoni, Marco; Alzari, Pedro; Mourey, Lionel; Burlet-Schiltz, Odile; Daffé, Mamadou; Marrakchi, Hedia

Ser/Thr phosphorylation regulates the fatty Acyl-AMP ligase activity of FadD32, an essential enzyme in mycolic acid biosynthesis Article de journal

Journal of Biological Chemistry, 291 (43), p. 22793–22805, 2016.

Liens

Mazzolini, Laurent; ï, Ana; Froment, Carine; Burlet-Schiltz, Odile; Besson, Arnaud; Manenti, Stéphane; Dozier, Christine

Phosphorylation of CDC25A on SER283 in late S/G2 by CDK/cyclin complexes accelerates mitotic entry Article de journal

Cell Cycle, 15 (20), p. 2742-2752, 2016.

Liens

Testard, Ambroise; Da Silva, Daniel ; Ormancey, Mélanie; Pichereaux, Carole; Pouzet, Cécile; Jauneau, Alain; Grat, Sabine; Robe, Eugénie; è, Christian Bri; Cotelle, Valérie; Mazars, Christian; Thuleau, Patrice

Calcium- and Nitric Oxide-Dependent Nuclear Accumulation of Cytosolic Glyceraldehyde-3-Phosphate Dehydrogenase in Response to Long Chain Bases in Tobacco BY-2 Cells Article de journal

Plant & cell physiology, 57 (10), p. 2221-2231, 2016.

Liens

Osseni, Alexis; Sébastien, Muriel; Sarrault, Oriana; Baudet, Mathieu; Couté, Yohann; Fauré, Julien; Fourest-Lieuvin, Anne; Marty, Isabelle

Triadin and CLIMP-63 form a link between triads and microtubules in muscle cells Article de journal

Journal of Cell Science, 129 (20), p. 3744-3755, 2016.

Liens

Hesse, Anne-Marie; Dupierris, Véronique; Adam, Claire; Court, Magali; Barthe, Damien; Emadali, Anouk; Masselon, Christophe; Ferro, Myriam; Bruley, Christophe

hEIDI: An Intuitive Application Tool To Organize and Treat Large-Scale Proteomics Data Article de journal

Journal of Proteome Research, 15 (10), p. 3896-3903, 2016.

Liens

Frottin, F; Bienvenut, WV.; Bignon, J; Jacquet, E; Jacome, AS. Vaca; Van Dorsselaer, A; Cianférani, S; Carapito, C; Meinnel, T; Giglione, C

MetAP1 and MetAP2 drive cell selectivity for a potent anti-cancer agent in synergy, by controlling glutathione redox state Article de journal

Oncotarget, 7 (39), p. 63306-63323, 2016.

Liens

Jungas, Thomas; Perchey, Renaud T; Fawal, Mohamad; Callot, Caroline; Froment, Carine; Burlet-Schiltz, Odile; Besson, Arnaud; Davy, Alice

Eph-mediated tyrosine phosphorylation of citron kinase controls abscission Article de journal

Journal of Cell Biology, 214 (5), p. 555-569, 2016.

Liens

Steingruber, Mirjam; Kraut, Alexandra; Socher, Eileen; Sticht, Heinrich; Reichel, Anna; Stamminger, Thomas; Amin, Bushra; Couté, Yohann; Hutterer, Corina; Marschall, Manfred

Proteomic Interaction Patterns between Human Cyclins, the Cyclin-Dependent Kinase Ortholog pUL97 and Additional Cytomegalovirus Proteins Article de journal

Viruses, 8 (8), 2016.

Liens

Gay, Gabrielle; Braun, Laurence; Brenier-Pinchart, Marie-Pierre; Vollaire, Julien; Josserand, Véronique; Bertini, Rose-Laurence; Varesano, Aurélie; Touquet, Bastien; Bock, Pieter-Jan De; Couté, Yohann; Tardieux, Isabelle; Bougdour, Alexandre; Hakimi, Mohamed-Ali

Toxoplasma gondii TgIST co-opts host chromatin repressors dampening STAT1-dependent gene regulation and IFN-γ-mediated host defenses Article de journal

The Journal of Experimental Medicine, 213 (9), p. 1779-1798, 2016.

Liens

Goold, Hugh Douglas; Cuiné, Stéphan; Légeret, Bertrand; Liang, Yuanxue; Brugière, Sabine; Auroy, Pascaline; Javot, Hélène; Tardif, Marianne; Jones, Brian; Beisson, Fred; Peltier, Gilles; Li-Beisson, Yonghua

Saturating Light Induces Sustained Accumulation of Oil in Plastidal Lipid Droplets in Chlamydomonas reinhardtii Article de journal

Plant Physiology, 171 (4), p. 2406-2417, 2016.

Liens

Tarasova, Irina A; Masselon, Christophe D; Gorshkov, Alexander V; Gorshkov, Mikhail V

Predictive chromatography of peptides and proteins as a complementary tool for proteomics Article de journal

The Analyst, 141 (16), p. 4816-4832, 2016.

Liens

Lazar, Ikrame; Clement, Emily; Dauvillier, Stéphanie; Milhas, Delphine; Ducoux-Petit, Manuelle; LeGonidec, Sophie; Moro, Coédric; Soldan, Vanessa; Dalle, Stephane; Balor, Stéphanie; Golzio, Muriel; Burlet-Schiltz, Odile; Valet, Philippe; Muller, Catherine; Nieto, Laurence

Adipocyte Exosomes Promote Melanoma Aggressiveness through Fatty Acid Oxidation: A Novel Mechanism Linking Obesity and Cancer Article de journal

Cancer Research, 76 (14), p. 4051-4057, 2016.

Liens

Gianetto, Quentin Giai; Couté, Yohann; Bruley, Christophe; Burger, Thomas

Uses and misuses of the fudge factor in quantitative discovery proteomics Article de journal

Proteomics, 16 (14), p. 1955-1960, 2016.

Liens

Pichereaux, Carole; Hernández-Domínguez, Eric E; Santos-Diaz, Maria Del Socorro; Reyes-Agüero, Antonio; Astello-García, Marizel; Guéraud, Françoise; Negre-Salvayre, Anne; Schiltz, Odile; Rossignol, Michel; Barba de la Rosa, Ana Paulina

Comparative shotgun proteomic analysis of wild and domesticated Opuntia spp. species shows a metabolic adaptation through domestication Article de journal

Journal of proteomics, 143 , p. 353–364, 2016.

Liens

Petropoulos, Christos; Oddou, Christiane; Emadali, Anouk; Hiriart-Bryant, Edwige; Boyault, Cyril; Faurobert, Eva; Pol, Scott Vande; Kim-Kaneyama, Joo-Ri; Kraut, Alexandra; Couté, Yohann; Block, Marc; Albiges-Rizo, Corinne; Destaing, Olivier

Roles of paxillin family members in adhesion and ECM degradation coupling at invadosomes Article de journal

The Journal of Cell Biology, 213 (5), p. 585–599, 2016.

Liens

Paleari, R; Caruso, D; Kaiser, P; Arsene, C G; Schaeffer-Reiss, C; Van Dorsselaer, A; Bissé, E; Ospina, M; Jesús, VR. De; Wild, B; Mosca, A

Developing a reference system for the IFCC standardization of HbA2 Article de journal

Clin Chim Acta, 467 , p. 21–26, 2016.

Liens

Fliegmann, Judith; Jauneau, Alain; Pichereaux, Carole; Rosenberg, Charles; Gasciolli, Virginie; Timmers, Antonius C J; Burlet-Schiltz, Odile; Cullimore, Julie; Bono, Jean Jacques

LYR3, a high-affinity LCO-binding protein of Medicago truncatula, interacts with LYK3, a key symbiotic receptor Article de journal

FEBS Letters, 590 (10), p. 1477–1487, 2016.

Liens

Zvezdova, Ekaterina; Mikolajczak, Judith; Garreau, Anne; Marcellin, Marlène; Rigal, Lise; Lee, Jan; Choi, Seeyoung; Blaize, Gaëtan; Argenty, Jérémy; Familiades, Julien; Li, Liqi; Gonzalez De Peredo, Anne ; Burlet-Schiltz, Odile; Love, Paul E; Lesourne, Renaud

Themis1 enhances T cell receptor signaling during thymocyte development by promoting Vav1 activity and Grb2 stability Article de journal

Science Signaling, 9 (428), p. ra51, 2016.

Liens

Salvetti, Anna; Couté, Yohann; Epstein, Alberto; Arata, Loredana; Kraut, Alexandra; Navratil, Vincent; Bouvet, Philippe; Greco, Anna

Nuclear Functions of Nucleolin through Global Proteomics and Interactomic Approaches Article de journal

Journal of Proteome Research, 15 (5), p. 1659–1669, 2016.

Liens

Lazar, Cosmin; Gatto, Laurent; Ferro, Myriam; Bruley, Christophe; Burger, Thomas

Accounting for the Multiple Natures of Missing Values in Label-Free Quantitative Proteomics Data Sets to Compare Imputation Strategies Article de journal

Journal of Proteome Research, 15 (4), p. 1116-1125, 2016.

Liens

Ma, Sheng; Martin-Laffon, Jacqueline; Mininno, Morgane; Gigarel, Océane; Brugière, Sabine; Bastien, Olivier; Tardif, Marianne; Ravanel, Stéphane; Alban, Claude

Molecular Evolution of the Substrate Specificity of Chloroplastic Aldolases/Rubisco Lysine Methyltransferases in Plants Article de journal

Molecular Plant, 9 (4), p. 569-581, 2016.

Liens

Ramus, Claire; Hovasse, Agnès; Marcellin, Marlène; Hesse, Anne Marie; Mouton-Barbosa, Emmanuelle; Bouyssié, David; Vaca, Sebastian; Carapito, Christine; Chaoui, Karima; Bruley, Christophe; Garin, Jérôme; Cianférani, Sarah; Ferro, Myriam; Dorssaeler, Alain Van; Burlet-Schiltz, Odile; Schaeffer, Christine; Couté, Yohann; Gonzalez de Peredo, Anne

Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods Article de journal

Data in Brief, 6 , p. 286-294, 2016.

Liens

Monkkonen, Lucas; Edgar, Scott J; Winters, Daniel; Heron, Scott R; Mackay, Logan C; Masselon, Christophe D; Stokes, Adam A; Langridge-Smith, Patrick R R; Goodlett, David R

Screen-printed digital microfluidics combined with surface acoustic wave nebulization for hydrogen-deuterium exchange measurements Article de journal

Journal of Chromatography. A, 1439 , p. 161-166, 2016.

Liens

Michaud, Morgane; Gros, Valérie; Tardif, Marianne; Brugière, Sabine; Ferro, Myriam; Prinz, William A; Toulmay, Alexandre; Mathur, Jaideep; Wozny, Michael; Falconet, Denis; Maréchal, Eric; Block, Maryse A; Jouhet, Juliette

AtMic60 Is Involved in Plant Mitochondria Lipid Trafficking and Is Part of a Large Complex Article de journal

Current biology: CB, 26 (5), p. 627-639, 2016.

Liens

Hovasse, Agnès ; Bruneel, Odile ; Casiot, Corinne ; Desoeuvre, Angélique ; Farasin, Julien ; Hery, Marina ; Van Dorsselaer, Alain ; Carapito, Christine ; Arsène-Ploetze, Florence

Spatio-Temporal Detection of the Thiomonas Population and the Thiomonas Arsenite Oxidase Involved in Natural Arsenite Attenuation Processes in the Carnoulès Acid Mine Drainage Article de journal

Front Cell Dev Biol, 4 , 2016, ISSN: 2296-634X.

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Locard-Paulet, Marie; Pible, Olivier; Gonzalez De Peredo, Anne ; Alpha-Bazin, Béatrice; Almunia, Christine; Burlet-Schiltz, Odile; Armengaud, Jean

Clinical implications of recent advances in proteogenomics Divers

2016, ISSN: 17448387.

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Rejón, J D; Delalande, F; Schaeffer-Reiss, C; de Alché, Dios J; Rodríguez-García, M I; Dorsselaer, Van A; Castro, A J

The Pollen Coat Proteome: At the Cutting Edge of Plant Reproduction Article de journal

Proteomes, 4 (5), 2016.

Rhiel, M; Bittl, V; Tribensky, A; Charnaud, S C; Strecker, M; Muller, S; Lanzer, M; Sanchez, C J; Schaeffer-Reiss, C; Westermann, B; Crabb, B S; Gilson, P R; Kulzer, S; Przyborski, J M

Trafficking of the exported P. falciparum chaperone PfHsp70x Article de journal

Sci Rep, 6 , p. 36174., 2016.

Sangaré, L O; Alayi, T D; Westermann, B; Hovasse, A; Sindikubwabo, F; Callebaut, I; Werkmeister, E; Lafont, F; Slomianny, C; Hakimi, M A; Dorsselaer, Van A; Schaeffer-Reiss, C; Tomavo, S

Unconventional endosome-like compartment and retromer complex in Toxoplasma gondii govern parasite integrity and host infection. Article de journal

Nat. Commun., 7 , p. 11191, 2016.

Sigwalt, D; Caballero, R; Holler, M; Strub, J -M; Dorsselaer, Van A; Nierengarten, J -F

Ultra-Fast Dendritic Growth Based on the Grafting of Fullerene Hexa-Adduct Macromonomers onto a Fullerene Core Article de journal

Eur. J. Org. Chem., (16), p. 2882–2887, 2016.

Soty, M; Chilloux, J; Delalande, F; Zitoun, C; Bertile, F; Mithieux, G; Gautier-Stein, A

Post-Translational Regulation of the Glucose-6-Phosphatase Complex by Cyclic Adenosine Monophosphate Is a Crucial Determinant of Endogenous Glucose Production and Is Controlled by the Glucose-6-Phosphate Transporter Article de journal

J. Proteome Res., 15 (4), p. 1342−1349, 2016.

Terral, G; Beck, A; Cianférani, S

Insights from native mass spectrometry and ion mobility-mass spectrometry for antibody and antibody-based product characterization. Article de journal

J Chromatogr B Analyt Technol Biomed Life Sci., 1032 , p. 79-90., 2016.

Liens

Thébault, S; Agez, M; Chi, X; Stojko, J; Cura, V; Telerman, S B; Maillet, L; Gautier, F; Billas-Massobrio, I; Birck, C; Troffer-Charlier, N; Karafin, T; Honoré, J; Senff-Ribeiro, A; Montessuit, S; Johnson, C M; Juin, P; Cianférani, S; Martinou, J C; Andrews, D W; Amson, R; Telerman, A; Cavarelli, J

TCTP contains a BH3-like domain, which instead of inhibiting, activates Bcl-xL Article de journal

Sci Rep., 6 , p. 19725, 2016.

Voisinne, Guillaume ; Garca‐Blesa, Antonio ; Chaoui, Karima ; Fiore, Frédéric ; Bergot, Elise ; Girard, Laura ; Malissen, Marie ; Burlet‐Schiltz, Odile

Co‐recruitment analysis of the CBL and CBLB signalosomes in primary T cells identifies CD5 as a key regulator of TCR‐induced ubiquitylation Article de journal

Molecular Systems Biology, 12 (7), p. 876, 2016.

Liens

Chantalat, Elodie; Boudou, Frédéric; Laurell, Henrik; ë, Ga; Houtman, René; Melchers, Diana; Rochaix, Philippe; Filleron, Thomas; Stella, Alexandre; Burlet-Schiltz, Odile; Brouchet, Anne; Flouriot, Gilles; ë, Rapha; ç, Jean Fran; Fontaine, Coralie; ç, Fran

The AF-1-deficient estrogen receptor ER$alpha$46 isoform is frequently expressed in human breast tumors Article de journal

Breast Cancer Research, 18 (1), p. 123, 2016.

Liens

Al-Shuaeeb, RA. ; Kolodych, S; Koniev, O; Delacroix, S; Erb, S; Nicolaÿ, S; Cintrat, JC. ; Brion, JD. ; Cianférani, S; Alami, M; Wagner, A; Messaoudi, S

Palladium-Catalyzed Chemoselective and Biocompatible Functionalization of Cysteine-Containing Molecules at Room Temperature. Article de journal

Chemistry., 22 (32), p. 11365-70, 2016.

Liens

Desveaux, Cyrille; Klein, Julie; Leruez-Ville, Marianne; Ramirez-Torres, Adela; Lacroix, Chrystelle; Breuil, Benjamin; Froment, Carine; Bascands, Jean-Loup; Schanstra, Joost P; Ville, Yves

Identification of Symptomatic Fetuses Infected with Cytomegalovirus Using Amniotic Fluid Peptide Biomarkers Article de journal

PLoS pathogens, 12 (1), p. e1005395, 2016.

Liens

Armand, L; Biola-Clier, M; Bobyk, L; Collin-Faure, V; Diemer, H; Strub, J -M; Cianferani, S; Van Dorsselaer, A; Herlin-Boime, N; Rabilloud, T; Carriere, M

Molecular responses of alveolar epithelial A549 cells to chronic exposure to titanium dioxide nanoparticles: A proteomic view. Article de journal

J Proteomics., 134 , p. 163-73., 2016.

Laurent, Victor; Guérard, Adrien; Mazerolles, Catherine; Le Gonidec, Sophie ; Toulet, Aurélie; Nieto, Laurence; Zaidi, Falek; Majed, Bilal; Garandeau, David; Socrier, Youri; Golzio, Muriel; Cadoudal, Thomas; Chaoui, Karima; Dray, Cedric; Monsarrat, Bernard; Schiltz, Odile; Wang, Yuan Yuan; Couderc, Bettina; Valet, Philippe; Malavaud, Bernard; Muller, Catherine

Periprostatic adipocytes act as a driving force for prostate cancer progression in obesity Article de journal

Nature communications, 7 , p. 10230, 2016.

Liens

Aude-Garcia, C; Dalzon, B; Ravanat, J L; Collin-Faure, V; Diemer, H; Strub, J M; Cianferani, S; Dorsselaer, Van A; Carrière, M; Rabilloud, T

A combined proteomic and targeted analysis unravels new toxic mechanisms for zinc oxide nanoparticles in macrophages. Article de journal

J Proteomics, 134 , p. 174-85, 2016.

Farina, Francesca; Gaillard, Jérémie; Guérin, Christophe; Couté, Yohann; Sillibourne, James; Blanchoin, Laurent; Théry, Manuel

The centrosome is an actin-organizing centre Article de journal

Nature Cell Biology, 18 (1), p. 65-75, 2016.

Liens

Beck, A; Terral, G; Debaene, F; Wagner-Rousset, E; Marcoux, J; Janin-Bussat, M -C; Colas, O; Dorsselaer, Van A; Cianferani, S

Cutting-Edge Mass Spectrometry methods for multi-level antibody-drug conjugates structural characterization. Article de journal

Expert Review of Proteomics, 13 (2), p. 157-83, 2016.

Bragantini, B; Tiotiu, D; Rothé, B; Saliou, JM.; Marty, H; Cianférani, S; Charpentier, B; Quinternet, M; Manival, X

Functional and Structural Insights of the Zinc-Finger HIT protein family members Involved in Box C/D snoRNP Biogenesis. Article de journal

J Mol Biol., 428 (11), p. 2488-506, 2016.

Liens

Dalzon, B; Diemer, H; Collin-Faure, V; Cianférani, S; Rabilloud, T; Aude-Garcia, C

Culture medium-associated changes in the core proteome of macrophages and in their responses to copper oxide nanoparticles. Article de journal

Proteomics, 16 (22), p. 2864-2877., 2016.

Asmar, El Z; Terrand, J; Jenty, M; Host, L; Mlih, M; Zerr, A; Justiniano, H; Matz, R L; Boudier, C; Scholler, E; Garnier, J M; Bertaccini, D; Thierse, D; Schaeffer, C; Dorsselaer, Van A; Herz, J; Bruban, V; Boucher, P

Convergent Signaling Pathways Controlled by LRP1 (Receptor-related Protein 1) Cytoplasmic and Extracellular Domains Limit Cellular Cholesterol Accumulation. Article de journal

J Biol Chem, 291 (10), p. 5116-27., 2016.

Hammi, I; Delalande, F; Belkhou, R; Marchioni, E; Cianférani, S; Ennahar, S

Maltaricin CPN, a new class IIa bacteriocin produced by Carnobacterium maltaromaticum CPN isolated from mold ripened cheese Article de journal

J Appl Microbiol., 121 (5), p. 1268-1274, 2016.

Liens

Hovasse, A; Alayi, T D; Dorsselaer, Van A; Marchal, R; Jégou, S; Schaeffer-Reiss, C

In-depth glycoproteomic characterisation of grape berry vacuolar invertase using a combination of mass spectrometry-based approaches Article de journal

Food Chemistry, 200 , p. 237–244, 2016.

Zatylny-Gaudin, Céline; Cornet, Valérie; Leduc, Alexandre; Zanuttini, Bruno; Corre, Erwan; Corguillé, Gildas Le; Bernay, Benoît; Garderes, Johan; Kraut, Alexandra; Couté, Yohan; Henry, Joël

Neuropeptidome of the Cephalopod Sepia officinalis: Identification, Tissue Mapping, and Expression Pattern of Neuropeptides and Neurohormones during Egg Laying Article de journal

Journal of Proteome Research, 15 (1), p. 48-67, 2016.

Liens

Ramus, Claire; Hovasse, Agnès; Marcellin, Marlène; Hesse, Anne-Marie; Mouton-Barbosa, Emmanuelle; Bouyssié, David; Vaca, Sebastian; Carapito, Christine; Chaoui, Karima; Bruley, Christophe; Garin, Jérôme; Cianférani, Sarah; Ferro, Myriam; Dorssaeler, Alain Van; Burlet-Schiltz, Odile; Schaeffer, Christine; Couté, Yohann; Gonzalez de Peredo, Anne

Benchmarking quantitative label-free LC-MS data processing workflows using a complex spiked proteomic standard dataset Article de journal

Journal of Proteomics, 132 , p. 51–62, 2016.

Liens

Lanshoeft, C; Heudi, O; Cianférani, S

SMART Digest™ compared with pellet digestion for analysis of human immunoglobulin G1 in rat serum by liquid chromatography tandem mass spectrometry. Article de journal

Anal Biochem., 501 , p. 23-5., 2016.

Lanshoeft, C; Heudi, O; Cianférani, S; Warren, AP.; Picard, F; Kretz, O

Quantitative analysis of hIgG1 in monkey serum by LC-MS/MS using mass spectrometric immunoassay. Article de journal

Bioanalysis., 8 (10), p. 1035-49, 2016.

Liens

Lanshoeft, C; Wolf, T; Heudi, O; Cianférani, S; Barteau, S; Walles, M; Picard, F; Kretz, O

The use of generic surrogate peptides for the quantitative analysis of human immunoglobulin G1 in pre-clinical species with high-resolution mass spectrometry. Article de journal

Anal Bioanal Chem., 408 (6), p. 1687-99, 2016.

Lanshoeft, C; Wolf, T; Walles, M; Barteau, S; Picard, F; Kretz, O; Cianférani, S; Heudi, O

The flexibility of a generic LC-MS/MS method for the quantitative analysis of therapeutic proteins based on human immunoglobulin G and related constructs in animal studies. Article de journal

J Pharm Biomed Anal., 131 , p. 214-222, 2016.

Hodille, Elisabeth; Alekseeva, Ludmila; Berkova, Nadia; Serrier, Asma; Badiou, Cedric; Gilquin, Benoit; Brun, Virginie; Vandenesch, François; Terman, David S; Lina, Gerard

Staphylococcal Enterotoxin O Exhibits Cell Cycle Modulating Activity Article de journal

Frontiers in Microbiology, 7 , p. 441, 2016.

Liens

Lederer, M; Hahn, U; Strub, JM.; Cianférani, S; Dorsselaer, Van A; Nierengarten, JF.; Torres, T; Guldi, DM.

Probing Supramolecular Interactions between a Crown Ether-Appended Zinc Phthalocyanine and an Ammonium Group Appended to a C60 Derivative. Article de journal

Chemistry, 22 (6), p. 2051-2059, 2016.

Luche, S; Eymard-Vernain, E; Diemer, H; Dorsselaer, Van A; Rabilloud, T; Lelong, C

Zinc oxide induces the stringent response and major reorientations in the central metabolism of Bacillus subtilis. Article de journal

J Proteomics., 135 , p. 170-80., 2016.

Liens

Ma, S; Vigneron, S; Robert, P; Strub, J M; Cianferani, S; Castro, A; Lorca, T

Greatwall dephosphorylation and inactivation upon mitotic exit is triggered by PP1. Article de journal

J Cell Sci., 129 (7), p. 1329-39., 2016.

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