ProFi Achievements

Publications

715 Entrées « 6 de 8 »

2015

Zaccaria, Affif; Roux-Dalvai, Florence; Bouamrani, Ali; Mombrun, Adrien; Mossuz, Pascal; Monsarrat, Bernard; Berger, François

Accessing to the minor proteome of red blood cells through the influence of the nanoparticle surface properties on the corona composition. Article de journal

Dans: International journal of nanomedicine, vol. 10, p. 1869–83, 2015.

Liens

Boal, Frédéric; Mansour, Rana; Gayral, Marion; Saland, Estelle; Chicanne, Gaëtan; Xuereb, Jean-Marie; Marcellin, Marlène; Burlet-Schiltz, Odile; Sansonetti, Philippe J.; Payrastre, Bernard; Tronchère, Hélène

TOM1 is a PI5P effector involved in the regulation of endosomal maturation Article de journal

Dans: Journal of Cell Science, vol. 128, no. 4, p. 815–827, 2015.

Liens

Lebert, Dorothée; Louwagie, Mathilde; Goetze, Sandra; Picard, Guillaume; Ossola, Reto; Duquesne, Caroline; Basler, Konrad; Ferro, Myriam; Rinner, Oliver; Aebersold, Ruedi; Garin, Jérôme; Mouz, Nicolas; Brunner, Erich; Brun, Virginie

DIGESTIF: a universal quality standard for the control of bottom-up proteomics experiments Article de journal

Dans: Journal of Proteome Research, vol. 14, no. 2, p. 787–803, 2015.

Liens

Kessentini, Yousri; Burger, Thomas; Paquet, Thierry

A Dempster–Shafer Theory based combination of handwriting recognition systems with multiple rejection strategies Article de journal

Dans: Pattern Recognition, vol. 48, no. 2, p. 534-544, 2015.

Liens

Quinternet, M; Rothé, B; Barbier, M; Bobo, C; Saliou, JM.; Jacquemin, C; Back, R; Chagot, ME.; S., Cianférani; Meyer, P; Branlant, C; Charpentier, B; Manival, X

Structure/Function Analysis of Protein-Protein Interactions Developed by the Yeast Pih1 Platform Protein and Its Partners in Box C/D snoRNP Assembly. Article de journal

Dans: J Mol Biol., vol. 427, no. 17, p. 2816-2839., 2015.

Ramus, C; Hovasse, A; Marcellin, M; Hesse, AM.; Mouton-Barbosa, E; Bouyssié, D; Vaca, S; Carapito, C; Chaoui, K; Bruley, C; Garin, J; Cianférani, S; Ferro, M; Dorssaeler, A Van; Burlet-Schiltz, O; Schaeffer, C; Couté, Y; de Peredo, A Gonzalez

Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods. Article de journal

Dans: Data Brief., vol. 6, p. 286-94., 2015.

Saliou, JM.; Manival, X; Tillault, AS.; Atmanene, C; Bobo, C; Branlant, C; Dorsselaer, A Van; Charpentier, B; Cianférani, S

Combining native MS approaches to decipher archaeal box H/ACA ribonucleoprotein particle structure and activity. Article de journal

Dans: Proteomics, vol. 15, no. 16, p. 2851-2861., 2015.

Schnell, G; Boeuf, A; Jaulhac, B; Boulanger, N; Collin, E; Barthel, C; Martino, S De; Ehret-Sabatier, L

Proteomic analysis of three Borrelia burgdorferi sensu lato native species and disseminating clones: Relevance for Lyme vaccine design. Article de journal

Dans: Proteomics, vol. 15, p. 1280–1290, 2015.

Schnell, G; Boeuf, A; Westermann, B; Jaulhac, B; Lipsker, D; Carapito, C; Boulanger, N; Ehret-Sabatier, L

Discovery and targeted proteomics on cutaneous biopsies infected by borrelia to investigate lyme disease. Article de journal

Dans: Mol Cell Proteomics, vol. 14, no. 5, p. 1254-64., 2015.

Simonneau, C; Leclercq, B; Mougel, A; Adriaenssens, E; Paquet, C; Raibaut, L; Ollivier, N; Drobecq, H; Marcoux, J; Cianferani, S; Tulasne, D; de Jonge, H; Melnyk, O; Vicogne, J

Semi-synthesis of a HGF/SF kringle one (K1) domain scaffold generates a potent in vivo MET receptor agonist Article de journal

Dans: Chem. Sci., vol. 6, p. 2110-2121, 2015.

Stojko, J; Fieulaine, S; Petiot-Bécard, S; Dorsselaer, A Van; Meinnel, T; Giglione, C; Cianférani, S

Ion mobility coupled to native mass spectrometry as a relevant tool to investigate extremely small ligand-induced conformational changes Article de journal

Dans: Analyst, vol. 140, p. 7234, 2015.

Triboulet, S; Aude-Garcia, C; Armand, L; Collin-Faure, V; Chevallet, M; Diemer, H; Gerdil, A; Proamer, F; Strub, JM.; Habert, A; Herlin, N; Dorsselaer, A Van; Carrière, M; Rabilloud, T

Comparative proteomic analysis of the molecular responses of mouse macrophages to titanium dioxide and copper oxide nanoparticles unravels some toxic mechanisms for copper oxide nanoparticles in macrophages. Article de journal

Dans: PLoS One, vol. 10, no. 4, p. e0124496, 2015.

Jacome, A -S Vaca; Rabilloud, T; Schaeffer-Reiss, C; Rompais, M; Ayoub, D; Lane, L; Bairoch, A; Dorsselaer, A Van; Carapito, C

N-terminome analysis of the human mitochondrial proteome. Article de journal

Dans: Proteomics., vol. 15, no. 14, p. 2519-2524., 2015.

Fabre, Bertrand; Lambour, Thomas; Garrigues, Luc; Amalric, François; Vigneron, Nathalie; Menneteau, Thomas; Stella, Alexandre; Monsarrat, Bernard; den Eynde, Benoît Van; Burlet-Schiltz, Odile; Bousquet-Dubouch, Marie-Pierre

Deciphering preferential interactions within supramolecular protein complexes: the proteasome case. Article de journal

Dans: Molecular systems biology, vol. 11, no. 1, p. 771, 2015.

Liens

A receptor pair with an integrated decoy converts pathogen disabling of transcription factors to immunity Article de journal

Dans: Cell, vol. 161, no. 5, p. 1074–1088, 2015, ISSN: 0092-8674 10974172.

Liens

Ait-Ali, N.; Fridlich, R.; Millet-Puel, G.; Clerin, E.; Delalande, F.; Jaillard, C.; Blond, F.; Perrocheau, L.; Reichman, S.; Byrne, L. C.; Olivier-Bandini, A.; Bellalou, J.; Moyse, E.; Bouillaud, F.; Nicol, X.; Dalkara, D.; van Dorsselaer, A.; Sahel, J. A.; Leveillard, T.

Rod-Derived Cone Viability Factor Promotes Cone Survival by Stimulating Aerobic Glycolysis Article de journal

Dans: Cell, vol. 161, no. 4, p. 817-832, 2015, ISSN: 1097-4172 (Electronic) 0092-8674 (Linking).

Liens

Arsène-Ploetze, F.; Bertin, P. N.; Carapito, C.

Proteomic tools to decipher microbial community structure and functioning. Article de journal

Dans: Environ Sci Pollut Res Int., vol. 22, no. 18, p. 13599-612, 2015.

Mazzoleni, Meryl; Figuet, Sylvie; Martin-Laffon, Jacqueline; Mininno, Morgane; Gilgen, Annabelle; Leroux, Mélanie; Brugière, Sabine; Tardif, Marianne; Alban, Claude; Ravanel, Stéphane

Dual Targeting of the Protein Methyltransferase PrmA Contributes to Both Chloroplastic and Mitochondrial Ribosomal Protein L11 Methylation in Arabidopsis Article de journal

Dans: Plant & Cell Physiology, vol. 56, p. 1697-1710, 2015.

Liens

Ayoub, D; Bertaccini, D; Diemer, H; Wagner-Rousset, E; Colas, O; Cianferani, S; Dorsselaer, A Van; Beck, A; Schaeffer-Reiss, C

Characterization of the N Terminal Heterogeneities of Monoclonal Antibodies Using In-Gel Charge Derivatization of α-Amines and LC-MS/MS Article de journal

Dans: Anal Chem, vol. 87, no. 7, p. 3784-3790., 2015.

Beck, A; Debaene, F; Diemer, H; Wagner-Rousset, E; Colas, O; Dorsselaer, A Van; Cianférani, S

Cutting-edge mass spectrometry characterization of originator, biosimilar and biobetter antibodies Article de journal

Dans: Journal of Mass Spectrometry, vol. 50, no. 2, p. 285–297, 2015.

Beck, A; S., Cianferani

Harness the benefits of mass spectrometry for in-depth ADC analytical characterization. Article de journal

Dans: LCGC, Advances in Biopharmaceutical Analysis, vol. October 2015, p. 24-28, 2015.

Reichmann, Debora; Couté, Yohann; de Choudens, Sandrine Ollagnier

Dual Activity of Quinolinate Synthase: Triose Phosphate Isomerase and Dehydration Activities Play Together To Form Quinolinate Article de journal

Dans: Biochemistry, vol. 54, no. 42, p. 6443-6446, 2015.

Liens

Legendre, Matthieu; Lartigue, Audrey; Bertaux, Lionel; Jeudy, Sandra; Bartoli, Julia; Lescot, Magali; Alempic, Jean-Marie; Ramus, Claire; Bruley, Christophe; Labadie, Karine; Shmakova, Lyubov; Rivkina, Elizaveta; Couté, Yohann; Abergel, Chantal; Claverie, Jean-Michel

In-depth study of Mollivirus sibericum, a new 30,000-y-old giant virus infecting Acanthamoeba Article de journal

Dans: Proceedings of the National Academy of Sciences of the United States of America, vol. 112, no. 38, p. E5327-5335, 2015.

Liens

Vilmont, Valérie; Filhol, Odile; Hesse, Anne-Marie; Couté, Yohann; Hue, Christophe; Rémy-Tourneur, Léa; Mistou, Sylvie; Cochet, Claude; Chiocchia, Gilles

Modulatory role of the anti-apoptotic protein kinase CK2 in the sub-cellular localization of Fas associated death domain protein (FADD) Article de journal

Dans: Biochimica Et Biophysica Acta, vol. 1853, no. 11 Pt A, p. 2885-2896, 2015.

Liens

Bonnefond, L; Stojko, J; Mailliot, J; Troffer-Charlier, N; Cura, V; Wurtz, J -M; S., Cianférani; Cavarelli, J

Functional insights from high resolution structures of mouse protein arginine methyltransferase 6. Article de journal

Dans: J Struct Biol., vol. 191, p. 175–183, 2015.

Roux, Clémentine Le; Huet, Gaëlle; Jauneau, Alain; Camborde, Laurent; Trémousaygue, Dominique; Kraut, Alexandra; Zhou, Binbin; Levaillant, Marie; Adachi, Hiroaki; Yoshioka, Hirofumi; Raffaele, Sylvain; Berthomé, Richard; Couté, Yohann; Parker, Jane E; Deslandes, Laurent

A receptor pair with an integrated decoy converts pathogen disabling of transcription factors to immunity Article de journal

Dans: Cell, vol. 161, no. 5, p. 1074–1088, 2015.

Liens

Penzo, Marianna; Rocchi, Laura; Brugiere, Sabine; Carnicelli, Domenica; Onofrillo, Carmine; Couté, Yohann; Brigotti, Maurizio; Montanaro, Lorenzo

Human ribosomes from cells with reduced dyskerin levels are intrinsically altered in translation Article de journal

Dans: FASEB journal: official publication of the Federation of American Societies for Experimental Biology, vol. 29, no. 8, p. 3472–3482, 2015.

Liens

Chassefeyre, Romain; Martínez-Hernández, José; Bertaso, Federica; Bouquier, Nathalie; Blot, Béatrice; Laporte, Marine; Fraboulet, Sandrine; Couté, Yohann; Devoy, Anny; Isaacs, Adrian M; Pernet-Gallay, Karin; Sadoul, Rémy; Fagni, Laurent; Goldberg, Yves

Regulation of postsynaptic function by the dementia-related ESCRT-III subunit CHMP2B Article de journal

Dans: The Journal of Neuroscience: The Official Journal of the Society for Neuroscience, vol. 35, no. 7, p. 3155-3173, 2015.

Liens

Couderc, Christophe; Bollard, Julien; Couté, Yohann; Massoma, Patrick; Poncet, Gilles; Lepinasse, Florian; Hervieu, Valérie; Gadot, Nicolas; Sanchez, Jean-Charles; Scoazec, Jean-Yves; Diaz, Jean-Jacques; Roche, Colette

Mechanisms of local invasion in enteroendocrine tumors: identification of novel candidate cytoskeleton-associated proteins in an experimental mouse model by a proteomic approach and validation in human tumors Article de journal

Dans: Molecular and Cellular Endocrinology, vol. 399, p. 154–163, 2015.

Liens

Vanhove, Audrey Sophie; Duperthuy, Marylise; Charrière, Guillaume M; Roux, Frédérique Le; Goudenège, David; Gourbal, Benjamin; Kieffer-Jaquinod, Sylvie; Couté, Yohann; Wai, Sun Nyunt; Destoumieux-Garzón, Delphine

Outer membrane vesicles are vehicles for the delivery of Vibrio tasmaniensis virulence factors to oyster immune cells Article de journal

Dans: Environmental Microbiology, vol. 17, no. 4, p. 1152–1165, 2015, ISSN: 1462-2920.

Résumé | Liens

Dorier, M; Brun, E; Veronesi, G; Barreau, F; Pernet-Gallay, K; Desvergne, C; Rabilloud, T; Carapito, C; Herlin-Boime, N; Carrière, M

Impact of anatase and rutile titanium dioxide nanoparticles on uptake carriers and efflux pumps in Caco-2 gut epithelial cells. Article de journal

Dans: Nanoscale, vol. 7, no. 16, p. 7352-60., 2015.

Sage, Eric; Brenac, Ariel; Alava, Thomas; Morel, Robert; Dupré, Cécilia; Hanay, Mehmet Selim; Roukes, Michael L; Duraffourg, Laurent; Masselon, Christophe; Hentz, Sébastien

Neutral particle mass spectrometry with nanomechanical systems Article de journal

Dans: Nature Communications, vol. 6, p. 6482, 2015.

Liens

Court, Magali; Garin, Jérôme; Masselon, Christophe D

Urine sample preparation and fractionation for global proteome profiling by LC-MS Article de journal

Dans: Methods in Molecular Biology (Clifton, N.J.), vol. 1243, p. 175-186, 2015.

Liens

Ethuin, P; Marlard, S; Delosiere, M; Carapito, C; Delalande, F; Dorsselaer, A Van; Dehaut, A; Lencel, V; Duflos, G; Grard, T

Differentiation between fresh and frozen–thawed sea bass (Dicentrarchus labrax) fillets using two-dimensional gel electrophoresis Article de journal

Dans: Food Chemistry, vol. 176, no. 2015, p. 294-301, 2015.

Jakobi, S; Nguyen, PT.; Debaene, F; Cianférani, S; Reuter, K; Klebe, G

What Glues a Homodimer Together: Systematic Analysis of the Stabilizing Effect of an Aromatic Hot Spot in the Protein-Protein Interface of the tRNA-modifying Enzyme Tgt. Article de journal

Dans: ACS Chem Biol., vol. 10, no. 8, p. 1897-1907., 2015.

Mladenov, Petko; Finazzi, Giovanni; Bligny, Richard; Moyankova, Daniela; Zasheva, Diana; Boisson, Anne-Marie; Brugière, Sabine; Krasteva, Vasilena; Alipieva, Kalina; Simova, Svetlana; Tchorbadjieva, Magdalena; Goltsev, Vasiliy; Ferro, Myriam; Rolland, Norbert; Djilianov, Dimitar

In vivo spectroscopy and NMR metabolite fingerprinting approaches to connect the dynamics of photosynthetic and metabolic phenotypes in resurrection plant Haberlea rhodopensis during desiccation and recovery Article de journal

Dans: Frontiers in Plant Science, vol. 6, p. 564, 2015.

Liens

Kern, A; Schnell, G; Bernard, Q; Bœuf, A; Jaulhac, B; Collin, E; Barthel, C; Ehret-Sabatier, L; Boulanger, N

Heterogeneity of Borrelia burgdorferi Sensu Stricto Population and Its Involvement in Borrelia Pathogenicity: Study on Murine Model with Specific Emphasis on the Skin Interface. Article de journal

Dans: PLoS One., vol. 10, no. 7, p. e0133195., 2015.

Khammari, I; Lakhal, S; Westermann, B; Benkahla, A; Bouratbine, A; Dorsselaer, A Van; Saïd, M Ben; Schaeffer-Reiss, C; Saghrouni, F

Characterization of Soluble and Membrane-Bound Proteins of Toxoplasma gondii as Diagnostic Markers of Infection Article de journal

Dans: J Bacteriol Parasitol, vol. 6, p. 239, 2015.

Kolodych, S; Koniev, O; Baatarkhuu, Z; Bonnefoy, JY; Debaene, F; Cianférani, S; Dorsselaer, A Van; Wagner, A

CBTF: New Amine-to-Thiol Coupling Reagent for Preparation of Antibody Conjugates with Increased Plasma Stability. Article de journal

Dans: Bioconjug Chem, vol. 26, no. 2, p. 197-200, 2015.

Koniev, O; Kolodych, S; Baatarkhuu, Z; Stojko, J; Eberova, J; Bonnefoy, J -Y; Cianférani, S; Dorsselaer, A Van; Wagner, A

MAPN: First-in-Class Reagent for Kinetically Resolved Thiol-to-Thiol Conjugation. Article de journal

Dans: Bioconjug Chem., vol. 26, no. 9, p. 1863-1867., 2015.

Lebert, Dorothée; Picard, Guillaume; Beau-Larvor, Charlotte; Troncy, Lysiane; Lacheny, Christine; Maynadier, Bernadette; Low, Walter; Mouz, Nicolas; Brun, Virginie; Klinguer-Hamour, Christine; Jaquinod, Michel; Beck, Alain

Absolute and multiplex quantification of antibodies in serum using PSAQ™ standards and LC-MS/MS Article de journal

Dans: Bioanalysis, vol. 7, no. 10, p. 1237-1251, 2015.

Liens

Leveillard, T; Dorsselaer, A Van; Sahel, J A

Altruisme dans la rétine : les bâtonnets nourrissent les cônes. Altruism in the retina: sticks feed cones Article de journal

Dans: Medecine sciences, vol. 31, p. 828-830, 2015.

Marcoux, J; Champion, T; Colas, O; Wagner-Rousset, E; Corvaïa, N; Dorsselaer, A Van; Beck, A; Cianférani, S

Native mass spectrometry and ion mobility characterization of trastuzumab emtansine, a lysine-linked antibody drug conjugate. Article de journal

Dans: Protein Sci., vol. 24, p. 1210-1223, 2015.

Marcoux, J; Cianférani, S

Towards integrative structural mass spectrometry: Benefits from hybrid approaches. Article de journal

Dans: Methods, vol. 89, p. 4-12, 2015.

PP, Porcari Degiacomi MT Verona Taylor GW Giorgetti Raimondi Sanglier-Cianférani Benesch JL Cecconi Naqvi MM Gillmore JD Hawkins PN Stoppini Robinson CV Pepys MB Bellotti R G S S S C M V Marcoux J Mangione

A novel mechano-enzymatic cleavage mechanism underlies transthyretin amyloidogenesis. Article de journal

Dans: EMBO Mol Med., vol. 7, no. 10, p. 1337-49., 2015.

Martin, P; Dubois, C; Jacquier, E; Dion, S; Mancini-Bourgine, M; Godon, O; Kratzer, R; Lelu-Santolaria, K; Evlachev, A; Meritet, JF.; Schlesinger, Y; Villeval, D; Strub, JM.; Dorsselaer, A Van; Marchand, JB.; Geist, M; Brandely, R; i Findel, A; Boukhebza, H; Menguy, T; Silvestre, N; Michel, ML.; Inchauspé, G

TG1050, an immunotherapeutic to treat chronic hepatitis B, induces robust T cells and exerts an antiviral effect in HBV-persistent mice Article de journal

Dans: Gut, vol. 64, no. 12, p. 1961-71., 2015.

Martinez-Zapien, D; Saliou, JM.; Han, X; Atmanene, C; Proux, F; Cianférani, S; Dock-Bregeon, AC.

Intermolecular recognition of the non-coding RNA 7SK and HEXIM protein in perspective. Article de journal

Dans: Biochimie, vol. 117, p. 63-71., 2015.

2014

Lacroix, Chrystelle; Caubet, Cécile; de Peredo, Anne Gonzalez; Breuil, Benjamin; Bouyssié, David; Stella, Alexandre; Garrigues, Luc; Gall, Caroline Le; Raevel, Anthony; Massoubre, Angelique; Klein, Julie; Decramer, Stéphane; Sabourdy, Frédérique; Bandin, Flavio; Burlet-Schiltz, Odile; Monsarrat, Bernard; Schanstra, Joost-Peter; Bascands, Jean-Loup

Label-free Quantitative Urinary Proteomics Identifies the Arginase Pathway as a New Player in Congenital Obstructive Nephropathy Article de journal

Dans: Molecular & Cellular Proteomics, vol. 13, no. 12, p. 3421–3434, 2014.

Liens

Bray, Lauriane; Froment, Carine; Pardo, Pierre; Candotto, Cédric; Burlet-Schiltz, Odile; Zajac, Jean Marie; Mollereau, Catherine; Moulédous, Lionel

Identification and functional characterization of the phosphorylation sites of the neuropeptide FF2 receptor Article de journal

Dans: Journal of Biological Chemistry, vol. 289, no. 49, p. 33754–33766, 2014.

Liens

Schild, Florie; Kieffer-Jaquinod, Sylvie; Palencia, Andrés; Cobessi, David; Sarret, Géraldine; Zubieta, Chloé; Jourdain, Agnès; Dumas, Renaud; Forge, Vincent; Testemale, Denis; Bourguignon, Jacques; Hugouvieux, Véronique

Biochemical and biophysical characterization of the selenium-binding and reducing site in Arabidopsis thaliana homologue to mammals selenium-binding protein 1 Article de journal

Dans: The Journal of Biological Chemistry, vol. 289, no. 46, p. 31765-31776, 2014.

Liens

Estellon, Johan; de Choudens, Sandrine Ollagnier; Smadja, Myriam; Fontecave, Marc; Vandenbrouck, Yves

An integrative computational model for large-scale identification of metalloproteins in microbial genomes: a focus on iron-sulfur cluster proteins Article de journal

Dans: Metallomics: Integrated Biometal Science, vol. 6, no. 10, p. 1913-1930, 2014.

Liens

Mazars, Christian; Brière, Christian; Grat, Sabine; Pichereaux, Carole; Rossignol, Michel; Pereda-Loth, Veronica; Eche, Brigitte; Boucheron-Dubuisson, Elodie; Disquet, Isabel Le; Medina, Francisco-Javier; Graziana, Annick; Carnero-Diaz, Eugénie

Microsome-associated proteome modifications of Arabidopsis seedlings grown on board the International Space Station reveal the possible effect on plants of space stresses other than microgravity. Article de journal

Dans: Plant signaling & behavior, vol. 9, no. 9, p. e29637, 2014.

Liens

Poirier, Aurore C; Schmitt, Paulina; Rosa, Rafael D; Vanhove, Audrey S; Kieffer-Jaquinod, Sylvie; Rubio, Tristan P; Charrière, Guillaume M; Destoumieux-Garzón, Delphine

Antimicrobial histones and DNA traps in invertebrate immunity: evidences in Crassostrea gigas Article de journal

Dans: The Journal of Biological Chemistry, vol. 289, no. 36, p. 24821-24831, 2014.

Liens

Martinez-Pinna, Roxana; de Peredo, Anne Gonzalez; Monsarrat, Bernard; Burlet-Schiltz, Odile; Martin-Ventura, Jose Luis

Label-free quantitative proteomic analysis of human plasma-derived microvesicles to find protein signatures of abdominal aortic aneurysms Article de journal

Dans: Proteomics - Clinical Applications, vol. 8, no. 7-8, p. 620–625, 2014.

Liens

Hoedt, Esthelle; Chaoui, Karima; Huvent, Isabelle; Mariller, Christophe; Monsarrat, Bernard; Burlet-Schiltz, Odile; Pierce, Annick

SILAC-based proteomic profiling of the human MDA-MB-231 metastatic breast cancer cell line in response to the two antitumoral lactoferrin isoforms: The secreted lactoferrin and the intracellular delta-lactoferrin Article de journal

Dans: PLoS ONE, vol. 9, no. 8, p. e104563, 2014.

Liens

Britton, Sébastien; Dernoncourt, Emma; Delteil, Christine; Froment, Carine; Schiltz, Odile; Salles, Bernard; Frit, Philippe; Calsou, Patrick

DNA damage triggers SAF-A and RNA biogenesis factors exclusion from chromatin coupled to R-loops removal. Article de journal

Dans: Nucleic acids research, vol. 42, no. 14, p. 9047–62, 2014.

Liens

Milbradt, Jens; Kraut, Alexandra; Hutterer, Corina; Sonntag, Eric; Schmeiser, Cathrin; Ferro, Myriam; Wagner, Sabrina; Lenac, Tihana; Claus, Claudia; Pinkert, Sandra; Hamilton, Stuart T; Rawlinson, William D; Sticht, Heinrich; Couté, Yohann; Marschall, Manfred

Proteomic analysis of the multimeric nuclear egress complex of human cytomegalovirus Article de journal

Dans: Molecular & cellular proteomics: MCP, vol. 13, no. 8, p. 2132-2146, 2014.

Liens

Schvartz, Domitille; Couté, Yohann; Sanchez, Jean-Charles

Quantitative proteomics reveals the link between minichromosome maintenance complex and glucose-induced proliferation of rat pancreatic INS-1E β-cells Article de journal

Dans: Journal of Proteomics, vol. 108, p. 163-170, 2014.

Liens

Tomizioli, Martino; Lazar, Cosmin; Brugière, Sabine; Burger, Thomas; Salvi, Daniel; Gatto, Laurent; Moyet, Lucas; Breckels, Lisa M; Hesse, Anne-Marie; Lilley, Kathryn S; Seigneurin-Berny, Daphné; Finazzi, Giovanni; Rolland, Norbert; Ferro, Myriam

Deciphering thylakoid sub-compartments using a mass spectrometry-based approach Article de journal

Dans: Molecular & cellular proteomics: MCP, vol. 13, no. 8, p. 2147-2167, 2014.

Liens

Gatto, Laurent; Breckels, Lisa M; Burger, Thomas; Nightingale, Daniel J H; Groen, Arnoud J; Campbell, Callum; Nikolovski, Nino; Mulvey, Claire M; Christoforou, Andy; Ferro, Myriam; Lilley, Kathryn S

A foundation for reliable spatial proteomics data analysis Article de journal

Dans: Molecular & cellular proteomics: MCP, vol. 13, no. 8, p. 1937-1952, 2014.

Liens

Fabre, Bertrand; Lambour, Thomas; Garrigues, Luc; Ducoux-Petit, Manuelle; Amalric, François; Monsarrat, Bernard; Burlet-Schiltz, Odile; Bousquet-Dubouch, Marie Pierre

Label-free quantitative proteomics reveals the dynamics of proteasome complexes composition and stoichiometry in a wide range of human cell lines Article de journal

Dans: Journal of Proteome Research, vol. 13, no. 6, p. 3027–3037, 2014.

Liens

Xiol, Jordi; Spinelli, Pietro; Laussmann, Maike A; Homolka, David; Yang, Zhaolin; Cora, Elisa; Couté, Yohann; Conn, Simon; Kadlec, Jan; Sachidanandam, Ravi; Kaksonen, Marko; Cusack, Stephen; Ephrussi, Anne; Pillai, Ramesh S

RNA clamping by Vasa assembles a piRNA amplifier complex on transposon transcripts Article de journal

Dans: Cell, vol. 157, no. 7, p. 1698-1711, 2014.

Liens

Gatto, Laurent; Breckels, Lisa M; Wieczorek, Samuel; Burger, Thomas; Lilley, Kathryn S

Mass-spectrometry-based spatial proteomics data analysis using pRoloc and pRolocdata Article de journal

Dans: Bioinformatics (Oxford, England), vol. 30, no. 9, p. 1322-1324, 2014.

Liens

Trauchessec, Mathieu; Jaquinod, Michel; Bonvalot, Aline; Brun, Virginie; Bruley, Christophe; Ropers, Delphine; de Jong, Hidde; Garin, Jérôme; Bestel-Corre, Gwenaëlle; Ferro, Myriam

Mass spectrometry-based workflow for accurate quantification of Escherichia coli enzymes: how proteomics can play a key role in metabolic engineering Article de journal

Dans: Molecular & cellular proteomics: MCP, vol. 13, no. 4, p. 954-968, 2014.

Liens

Doustaly, Fany; Combes, Florence; Fiévet, Julie B; Berthet, Serge; Hugouvieux, Véronique; Bastien, Olivier; Aranjuelo, Iker; Leonhardt, Nathalie; Rivasseau, Corinne; Carrière, Marie; Vavasseur, Alain; Renou, Jean-Pierre; Vandenbrouck, Yves; Bourguignon, Jacques

Uranium perturbs signaling and iron uptake response in Arabidopsis thaliana roots Article de journal

Dans: Metallomics: Integrated Biometal Science, vol. 6, no. 4, p. 809–821, 2014.

Liens

Martineau, Yvan; Wang, Xiaoshan; Alain, Tommy; Petroulakis, Emmanuel; Shahbazian, David; Fabre, Bertrand; Bousquet-Dubouch, Marie-Pierre; Monsarrat, Bernard; Pyronnet, Stéphane; Sonenberg, Nahum

Control of Paip1-eukayrotic translation initiation factor 3 interaction by amino acids through S6 kinase. Article de journal

Dans: Molecular and cellular biology, vol. 34, no. 6, p. 1046–53, 2014.

Liens

Mazars, Christian; Brière, Christian; Grat, Sabine; Pichereaux, Carole; Rossignol, Michel; Pereda-Loth, Veronica; Eche, Brigitte; Boucheron-Dubuisson, Elodie; Disquet, Isabel Le; Medina, Francisco Javier; Graziana, Annick; Carnero-Diaz, Eugénie

Microgravity induces changes in microsome-associated proteins of Arabidopsis seedlings grown on board the international space station. Article de journal

Dans: PloS one, vol. 9, no. 3, p. e91814, 2014.

Liens

Legendre, Matthieu; Bartoli, Julia; Shmakova, Lyubov; Jeudy, Sandra; Labadie, Karine; Adrait, Annie; Lescot, Magali; Poirot, Olivier; Bertaux, Lionel; Bruley, Christophe; Couté, Yohann; Rivkina, Elizaveta; Abergel, Chantal; Claverie, Jean-Michel

Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology Article de journal

Dans: Proceedings of the National Academy of Sciences of the United States of America, vol. 111, no. 11, p. 4274–4279, 2014.

Liens

Nguyen-Lefebvre, A T; Leprun, G; Morin, V; Viñuelas, J; Couté, Y; Madjar, J -J; Gandrillon, O; Gonin-Giraud, S

V-erbA generates ribosomes devoid of RPL11 and regulates translational activity in avian erythroid progenitors Article de journal

Dans: Oncogene, vol. 33, no. 12, p. 1581–1589, 2014.

Liens

Siguier, Béatrice; Haon, Mireille; Nahoum, Virginie; Marcellin, Marlène; Burlet-Schiltz, Odile; Coutinho, Pedro M; Henrissat, Bernard; Mourey, Lionel; O'Donohue, Michael J; Berrin, Jean Guy; Tranier, Samuel; Dumon, Claire

First structural insights into $alpha$-L-Arabinofuranosidases from the two GH62 glycoside hydrolase subfamilies Article de journal

Dans: Journal of Biological Chemistry, vol. 289, no. 8, p. 5261–5273, 2014.

Liens

Elsen, Sylvie; Huber, Philippe; Bouillot, Stéphanie; Couté, Yohann; Fournier, Pierre; Dubois, Yohann; Timsit, Jean-François; Maurin, Max; Attrée, Ina

A type III secretion negative clinical strain of Pseudomonas aeruginosa employs a two-partner secreted exolysin to induce hemorrhagic pneumonia Article de journal

Dans: Cell Host & Microbe, vol. 15, no. 2, p. 164-176, 2014.

Liens

Graindorge, Matthieu; Giustini, Cécile; Kraut, Alexandra; Moyet, Lucas; Curien, Gilles; Matringe, Michel

Three different classes of aminotransferases evolved prephenate aminotransferase functionality in arogenate-competent microorganisms Article de journal

Dans: The Journal of Biological Chemistry, vol. 289, no. 6, p. 3198-3208, 2014.

Liens

Plumel, M I; Stier, A; Thiersé, D; Dorsselaer, A Van; Criscuolo, F; Bertile, F

Litter size manipulation in laboratory mice: an example of how proteomic analysis can uncover new mechanisms underlying the cost of reproduction Article de journal

Dans: Frontiers in Zoology, vol. 11, no. 41, 2014.

Ranaei-Siadat, E; Merigoux, C; Seijo, B; Ponchon, L; Saliou, J M; Bernauer, J; Sanglier-Cianferani, S; Dardel, F; Vachette, P; Nonin-Lecomte, S

In vivo tmRNA protection by SmpB and pre-ribosome binding conformation in solution Article de journal

Dans: RNA, vol. 20, no. 10, p. 1607-20, 2014, ISSN: 1469-9001 (Electronic) 1355-8382 (Linking).

Liens

Rejon, J D; Delalande, F; Schaeffer-Reiss, C; Carapito, C; Zienkiewicz, K; de Dios Alche, J; Rodriguez-Garcia, M Isabel; Dorsselaer, A Van; Castro, A J

The plant stigma exudate: a biochemically active extracellular environment for pollen germination? Article de journal

Dans: Plant Signal Behav, vol. 9, p. e28274, 2014, ISSN: 1559-2324 (Electronic) 1559-2316 (Linking).

Liens

Rothe, B; Saliou, J M; Quinternet, M; Back, R; Tiotiu, D; Jacquemin, C; Loegler, C; Schlotter, F; Pena, V; Eckert, K; Morera, S; Dorsselaer, A V; Branlant, C; Massenet, S; Sanglier-Cianferani, S; Manival, X; Charpentier, B

Protein Hit1, a novel box C/D snoRNP assembly factor, controls cellular concentration of the scaffolding protein Rsa1 by direct interaction Article de journal

Dans: Nucleic Acids Res, vol. 42, no. 16, p. 10731-47, 2014, ISSN: 1362-4962 (Electronic) 0305-1048 (Linking).

Liens

Spagnolo, A; Larignon, P; Magnin-Robert, M; Hovasse, A; Cilindre, C; Dorsselaer, A Van; Clément, C; Schaeffer-Reiss, C; Fontaine, F

Flowering as the Most Highly Sensitive Period of Grapevine (Vitis vinifera L. cv Mourvèdre) to the Botryosphaeria Dieback Agents Neofusicoccum parvum and Diplodia seriata Infection Article de journal

Dans: Int. J. Mol. Sci., vol. 2014, no. 15, p. 9644-9669, 2014.

Liens

Spagnolo, A; Magnin-Robert, M; Alayi, T D; Cilindre, C; Schaeffer-Reiss, C; Dorsselaer, A Van; Clement, C; Larignon, P; Ramirez-Suero, M; Chong, J; Bertsch, C; Abou-Mansour, E; Fontaine, F

Differential responses of three grapevine cultivars to botryosphaeria dieback Article de journal

Dans: Phytopathology, vol. 104, no. 10, p. 1021-35, 2014, ISSN: 0031-949X (Print) 0031-949X (Linking).

Liens

Triboulet, S; Aude-Garcia, C; Armand, L; Gerdil, A; Diemer, H; Proamer, F; Collin-Faure, V; Habert, A; Strub, JM.; Hanau, D; Herlin, N; Carrière, M; Dorsselaer, A Van; Rabilloud, T

Analysis of cellular responses of macrophages to zinc ions and zinc oxide nanoparticles: a combined targeted and proteomic approach. Article de journal

Dans: Nanoscale, vol. 6, no. 11, p. 6102-6114, 2014.

Liens

Voinot, F; Fischer, C; Schmidt, C; Ehret-Sabatier, L; Angel, F

Controlled ingestion of kaolinite (5%) modulates enteric nitrergic innervation in rats Article de journal

Dans: Fundam Clin Pharmacol, vol. 28, no. 4, p. 405-13, 2014, ISSN: 1472-8206 (Electronic) 0767-3981 (Linking).

Liens

Wasselin, T; Zahn, S; Maho, Y Le; Dorsselaer, A Van; Raclot, T; Bertile, F

Exacerbated oxidative stress in the fasting liver according to fuel partitioning Article de journal

Dans: Proteomics, vol. 14, no. 16, p. 1905-1921, 2014.

Fabre, Bertrand; Lambour, Thomas; Garrigues, Luc; Ducoux-Petit, Manuelle; Amalric, Franois; Monsarrat, Bernard; Burlet-Schiltz, Odile; Bousquet-Dubouch, Marie Pierre

Label-free quantitative proteomics reveals the dynamics of proteasome complexes composition and stoichiometry in a wide range of human cell lines Article de journal

Dans: Journal of Proteome Research, vol. 13, no. 6, p. 3027–3037, 2014, ISSN: 1535-3893$backslash$r1535-3907 15353907.

Liens

Gatto, Laurent; Breckels, Lisa M.; Burger, Thomas; Nightingale, Daniel J. H.; Groen, Arnoud J.; Campbell, Callum; Nikolovski, Nino; Mulvey, Claire M.; Christoforou, Andy; Ferro, Myriam; Lilley, Kathryn S.

A Foundation for Reliable Spatial Proteomics Data Analysis Article de journal

Dans: Molecular & Cellular Proteomics, vol. 13, no. 8, p. 1937–1952, 2014, ISSN: 1535-9476.

Liens

Lacroix, Chrystelle; Caubet, Ccile; Gonzalez-de-Peredo, Anne; Breuil, Benjamin; Bouyssi,

Label-free Quantitative Urinary Proteomics Identifies the Arginase Pathway as a New Player in Congenital Obstructive Nephropathy Article de journal

Dans: Molecular & Cellular Proteomics, vol. 13, no. 12, p. 3421–3434, 2014, ISSN: 1535-9476.

Liens

Legendre, M.; Bartoli, J.; Shmakova, L.; Jeudy, S.; Labadie, K.; Adrait, A.; Lescot, M.; Poirot, O.; Bertaux, L.; Bruley, C.; Coute, Y.; Rivkina, E.; Abergel, C.; Claverie, J. M.

Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology Article de journal

Dans: Proceedings of the National Academy of Sciences, vol. 111, no. 11, p. 4274–4279, 2014, ISSN: 1215421109 0027-8424.

Liens

Martinez-Pinna, Roxana; de Peredo, Anne Gonzalez; Monsarrat, Bernard; Burlet-Schiltz, Odile; Martin-Ventura, Jose Luis

Label-free quantitative proteomic analysis of human plasma-derived microvesicles to find protein signatures of abdominal aortic aneurysms Article de journal

Dans: Proteomics - Clinical Applications, vol. 8, no. 7-8, p. 620–625, 2014, ISSN: 18628354.

Liens

Trauchessec, Mathieu; Jaquinod, Michel; Bonvalot, Aline; Brun, Virginie; Bruley, Christophe; Ropers, Delphine; de Jong, Hidde; Garin, Jrme; Bestel-Corre, Gwenalle; Ferro, Myriam

Mass spectrometry-based workflow for accurate quantification of Escherichia coli enzymes: how proteomics can play a key role in metabolic engineering. Article de journal

Dans: Molecular & cellular proteomics : MCP, vol. 13, no. 4, p. 954–68, 2014, ISSN: 1535-9484.

Liens

Abada, S.; Lecointre, A.; Christine, C.; Ehret-Sabatier, L.; Saupe, F.; Orend, G.; Brasse, D.; Ouadi, A.; Hussenet, T.; Laquerrière, P.; Elhabiri, M.; Charbonnière, L. J.

Phosphonated chelates for nuclear imaging. Article de journal

Dans: Org Biomol Chem., vol. 12, no. 47, p. 9601-20., 2014.

Alayi, T. D.; Van Dorsselaer, A.; Epting, T.; Bissé, E.; Schaeffer-Reiss, C.

Hb A2-Konz [δ50(D1)Ser → Thr; HBD: c.151T > A]: a New δ Chain Hemoglobin Variant Characterized by Mass Spectrometry and High Performance Liquid Chromatography Article de journal

Dans: Hemoglobin, vol. 38, no. 2, p. 133-136, 2014.

Alban, Claude; Tardif, Marianne; Mininno, Morgane; Brugière, Sabine; Gilgen, Annabelle; Ma, Sheng; Mazzoleni, Meryl; Gigarel, Océane; Martin-Laffon, Jacqueline; Ferro, Myriam; Ravanel, Stéphane

Uncovering the protein lysine and arginine methylation network in Arabidopsis chloroplasts Article de journal

Dans: PloS one, vol. 9, no. 4, p. e95512, 2014.

Liens

Engel, Elodie; Viargues, Perrine; Mortier, Magda; Taillebourg, Emmanuel; Couté, Yohann; Thevenon, Dominique; Fauvarque, Marie-Odile

Identifying USPs regulating immune signals in Drosophila: USP2 deubiquitinates Imd and promotes its degradation by interacting with the proteasome Article de journal

Dans: Cell communication and signaling: CCS, vol. 12, p. 41, 2014.

Liens

Brun, E; Barreau, F; Veronesi, G; Fayard, B; Sorieul, S; Chaneac, C; Carapito, C; Rabilloud, T; Mabondzo, A; Herlin-Boime, N; Carriere, M

Titanium dioxide nanoparticle impact and translocation through ex vivo, in vivo and in vitro gut epithelia Article de journal

Dans: Part Fibre Toxicol, vol. 11, p. 13, 2014, ISSN: 1743-8977 (Electronic) 1743-8977 (Linking).

Liens

Carapito, C; Burel, A; Guterl, P; Walter, A; Varrier, F; Fabrice, B; Dorsselaer, A Van

MSDA, a proteomics software suite for in-depth Mass Spectrometry Data Analysis using grid computing Article de journal

Dans: Proteomics, vol. 14, no. 9, p. 1014-9, 2014.

Lafaye, Céline; Barbier, Ewa; Miscioscia, Audrey; Saint-Pierre, Christine; Kraut, Alexandra; Couté, Yohann; Plo, Isabelle; Gasparutto, Didier; Ravanat, Jean-Luc; Breton, Jean

DNA binding of the p21 repressor ZBTB2 is inhibited by cytosine hydroxymethylation Article de journal

Dans: Biochemical and Biophysical Research Communications, vol. 446, no. 1, p. 341-346, 2014.

Liens

van Rooyen, Jason M; Murat, Jean-Benjamin; Hammoudi, Pierre-Mehdi; Kieffer-Jaquinod, Sylvie; Couté, Yohann; Sharma, Amit; Pelloux, Hervé; Belrhali, Hassan; Hakimi, Mohamed-Ali

Assembly of the novel five-component apicomplexan multi-aminoacyl-tRNA synthetase complex is driven by the hybrid scaffold protein Tg-p43 Article de journal

Dans: PloS One, vol. 9, no. 2, p. e89487, 2014.

Liens

Cebron, A; Arsene-Ploetze, F; Bauda, P; Bertin, P N; Billard, P; Carapito, C; Devin, S; Goulhen-Chollet, F; Poirel, J; Leyval, C

Rapid impact of phenanthrene and arsenic on bacterial community structure and activities in sand batches Article de journal

Dans: Microb Ecol, vol. 67, no. 1, p. 129-44, 2014, ISSN: 1432-184X (Electronic) 0095-3628 (Linking).

Liens

Forterre, Alexis; Jalabert, Audrey; Berger, Emmanuelle; Baudet, Mathieu; Chikh, Karim; Errazuriz, Elisabeth; Larichaudy, Joffrey De; Chanon, Stéphanie; Weiss-Gayet, Michèle; Hesse, Anne-Marie; Record, Michel; Geloen, Alain; Lefai, Etienne; Vidal, Hubert; Couté, Yohann; Rome, Sophie

Proteomic analysis of C2C12 myoblast and myotube exosome-like vesicles: a new paradigm for myoblast-myotube cross talk? Article de journal

Dans: PloS One, vol. 9, no. 1, p. e84153, 2014.

Liens

Cotte, V; Sabatier, L; Schnell, G; Carmi-Leroy, A; Rousselle, J C; Arsene-Ploetze, F; Malandrin, L; Sertour, N; Namane, A; Ferquel, E; Choumet, V

Differential expression of Ixodes ricinus salivary gland proteins in the presence of the Borrelia burgdorferi sensu lato complex Article de journal

Dans: J Proteomics, vol. 96, p. 29-43, 2014, ISSN: 1876-7737 (Electronic).

Liens

Debaene, F; Boeuf, A; Wagner-Rousset, E; Colas, O; Ayoub, D; Corvaia, N; Dorsselaer, A Van; Beck, A; Cianferani, S

Innovative native MS methodologies for Antibody Drug Conjugate Characterization: high resolution native MS and IM-MS for average DAR and DAR distribution assessment Article de journal

Dans: Anal Chem, vol. 86, p. 10674−10683, 2014, ISSN: 1520-6882 (Electronic) 0003-2700 (Linking).

Liens

Debeire, P; Delalande, F; Habrylo, O; Jeltsch, J; Dorsselaer, A Van; Phalip, V

Enzymatic cocktails produced by Fusarium graminearum under submerged fermentation using different lignocellulosic biomasses Article de journal

Dans: FEMS Microbiology Letters, vol. 355, p. 116-123, 2014.

715 Entrées « 6 de 8 »