Proline

An open source data integration framework and a software suite for mass spectrometry based proteomics:

  • Multiple search engines support
  • Target/decoy results validation
  • Benjamini-Hochberg FDR filtering 
  • Easy datasets comparison using spectral counting
  • Efficient label-free MS quantification
  • Isobaric labeling support (TMT, iTraQ)
  • PTM sites and clusters exploitation
  • User-friendly data visualization
  • Highly customizable results exp

ProlineSuite Version 2.2.0 : New Version to improve the PTMs oriented functionalities

This new release improves the PTMs oriented functionalities. The previous version introduced a clear distinction between modification sites and clusters of modifications .A significant work has been done on the visualisation and exploitation of these two concepts. See Release Note to get the full list of changes.

Proline Version 2.3.0 is available for download here 

Features

Discover the open-source Proline software suite

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Downloads

Download the latest stable release of Proline

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Support

Installation guide, user manual and training materials

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ProFi Proteomics
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